CX070593

Overview
NameCX070593
Unique NameCX070593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ECO8A (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O8 (strain IAI1) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.451e-41
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTSRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ECO55 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain 55989 / EAEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.451e-41
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTSRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ECO24 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.451e-41
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTSRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA2_BACHD (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus halodurans GN=hemL2 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.451e-41
Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            + P+P FL  +RR+T+ENG LLIFDEVMTGFR+ Y  AQ  FG+TPD           LPVGAYGG+R+IME +AP+GP+YQAGTLSGNPLAMTAG  TL +L E   YEY +++   L +G+    K+            M GFFFT+  V NF DA  S+   FA++++
Sbjct:  216 VPPEPGFLEELRRLTEENGTLLIFDEVMTGFRVGYHCAQGAFGITPDLTCLGKVIGGGLPVGAYGGKREIMEQIAPSGPIYQAGTLSGNPLAMTAGYETLVQLTE-ANYEYFDRLGDRLAEGLSAVAKEYDIPHYTSRAGSMVGFFFTDKKVKNFADASSSDLEFFAKYFK 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SULAA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 88/171 (51.46%), Postives = 112/171 (65.50%), Query Frame = -2
Query:    4 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 516
            +AP  ++   +R IT++ GALLIFDEVMTGFRLAYGGAQE +G+ PD           LPVGAYGG+R+IME VAP GP+YQAGTLSGNPLAM AG+  L+ LKE   Y  L++    L +G     ++   AI    +  M   FFT+ PV +F  AK S+T KFA+F+R
Sbjct:  215 VAPSKEYHQRLRDITRKYGALLIFDEVMTGFRLAYGGAQELYGIDPDLTTFGKVIGGGLPVGAYGGKREIMEYVAPVGPVYQAGTLSGNPLAMAAGLRQLQLLKELNPYRELDEKGRFLEEGFKQIAQEFSAAIQVNRVGSMITVFFTDIPVKDFATAKTSDTNKFAKFFR 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SHIDS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLHELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SHIB3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P+P+FL  +R +  E G LLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPQPEFLPGLRALCDEFGTLLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_HAHCH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Hahella chejuensis (strain KCTC 2396) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 84/173 (48.55%), Postives = 111/173 (64.16%), Query Frame = -2
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT-EGPVYNFEDAKKSETTKFARFYRG 516
            I P+P FL  +R +  E+G+LLIFDEVMTGFR+A GGAQ+ +GV PD           LPVGA+GGRRD+M  +AP GP+YQAGTLSGNPLAM  G+  L ++ EPG Y+ L   T  L +G+ +  + AG  +    + GMFGFFF+ E  V  FE   + +  +F +FY G
Sbjct:  213 IPPEPGFLETLRAVCDEHGSLLIFDEVMTGFRVALGGAQQVYGVKPDLTTLGKVIGAGLPVGAFGGRRDVMSHIAPLGPVYQAGTLSGNPLAMACGLTMLNKISEPGFYDALAAKTEALAKGLQERAQAAGVPLTINQVGGMFGFFFSEEKKVSRFEQVTRCDLERFRKFYHG 385          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_GEOLS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 82/170 (48.24%), Postives = 115/170 (67.65%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 516
            + P+P FL  +R +    G +LIFDEVM+GFR+AYGGAQ  +GVTPD           LPVGA+GG+R+IME ++P+G +YQAGTLSGNPLAMTAGI TLK L++PG Y+ L + + +L++GI  A + AG+ +    +  MF  FFT   V+++  A   +T  FAR++
Sbjct:  215 VPPRPGFLEGLRELCTNEGIILIFDEVMSGFRVAYGGAQSLYGVTPDMTTLGKIIGGGLPVGAFGGKREIMEKLSPSGGVYQAGTLSGNPLAMTAGIETLKFLQQPGFYDRLEEKSSQLSEGISLAARDAGYPLYSTRVGSMFCAFFTPHEVFDWTTAAACDTKAFARYF 384          
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ECOSM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41
Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = -2
Query:    7 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSETTKFARFY 516
            + P P+FL  +R +  E GALLI DEVMTGFR+A  GAQ+Y+GV PD           +PVGA+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++AG  +   ++ GMFG FFT+   V  ++D    +  +F RF+
Sbjct:  213 VPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFF 383          
The following BLAST results are available for this feature:
BLAST of CX070593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ECO8A2.451e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO552.451e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO242.451e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA2_BACHD2.451e-4150.29Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Baci... [more]
GSA_SULAA3.201e-4151.46Glutamate-1-semialdehyde 2,1-aminomutase OS=Sulfur... [more]
GSA_SHIDS3.201e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigel... [more]
GSA_SHIB33.201e-4145.61Glutamate-1-semialdehyde 2,1-aminomutase OS=Shigel... [more]
GSA_HAHCH3.201e-4148.55Glutamate-1-semialdehyde 2,1-aminomutase OS=Hahell... [more]
GSA_GEOLS3.201e-4148.24Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobac... [more]
GSA_ECOSM3.201e-4146.20Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070593 ID=CX070593; Name=CX070593; organism=Citrus sinensis; type=EST; length=517bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATTCC
TGAGCTCCACCATAAGCTAAACGAAATCCAGTCATGACTTCATCAAAGAT
CAGGAGAGCACCATTCTCTTTGGTGATACGGCGGATGGCATTAAGAAAGT
CAGGCTTAGGAGCAATG
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