CX070578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 3 Query: 522 TSTDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 ++TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 SATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLP 177
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16 Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 3 Query: 525 STDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 STDMPLGTAIHNIEITLG+GGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 STDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLP 176
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_VITVI (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_TOBAC (50S ribosomal protein L2, chloroplastic OS=Nicotiana tabacum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_SOLTU (50S ribosomal protein L2, chloroplastic OS=Solanum tuberosum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_SOLLC (50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_SOLBU (50S ribosomal protein L2, chloroplastic OS=Solanum bulbocastanum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_SINAL (50S ribosomal protein L2, chloroplastic OS=Sinapis alba GN=rpl2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_SILLA (50S ribosomal protein L2, chloroplastic OS=Silene latifolia GN=rpl2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175
BLAST of CX070578 vs. ExPASy Swiss-Prot
Match: RK2_RANMC (50S ribosomal protein L2, chloroplastic OS=Ranunculus macranthus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 528 TDMPLGTAIHNIEITLGKGGQLTRAAGAVAKLIAKEGKSATL*LP 662 TDMPLGTAIHNIEITLGKGGQL RAAGAVAKLIAKEGKSATL LP Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLP 175 The following BLAST results are available for this feature:
BLAST of CX070578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070578 ID=CX070578; Name=CX070578; organism=Citrus sinensis; type=EST; length=683bpback to top |