CX070577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_VIBVY (30S ribosomal protein S19 OS=Vibrio vulnificus (strain YJ016) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = -2 Query: 322 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 591 RSLKK PF+ HLL+K++K +K+ + TWSR S IIP M+G TIA+HNGR+H+P+++T+ M+GHKLGEFAPT +RGHA + +R Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTEEMIGHKLGEFAPTRTYRGHAADKKAKKR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_VIBVU (30S ribosomal protein S19 OS=Vibrio vulnificus GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = -2 Query: 322 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 591 RSLKK PF+ HLL+K++K +K+ + TWSR S IIP M+G TIA+HNGR+H+P+++T+ M+GHKLGEFAPT +RGHA + +R Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTEEMIGHKLGEFAPTRTYRGHAADKKAKKR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_STAS1 (30S ribosomal protein S19 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 47/92 (51.09%), Postives = 71/92 (77.17%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RS+KK PF +HL +K++ + +K++I TWSR STI P +GHT A+++GR+H+P+++T+ MVGHKLGEFAPT F+GHA +D ++RR Sbjct: 1 MARSIKKGPFADDHLKKKVEAQSGSEKKQVIKTWSRRSTIFPDFIGHTFAVYDGRKHVPVFVTEDMVGHKLGEFAPTRTFKGHAADDKKTRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_PASMU (30S ribosomal protein S19 OS=Pasteurella multocida GN=rpsS PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_MANSM (30S ribosomal protein S19 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_HAES2 (30S ribosomal protein S19 OS=Haemophilus somnus (strain 2336) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_HAES1 (30S ribosomal protein S19 OS=Haemophilus somnus (strain 129Pt) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_HAEPS (30S ribosomal protein S19 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_HAEIN (30S ribosomal protein S19 OS=Haemophilus influenzae GN=rpsS PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RS19_HAEIG (30S ribosomal protein S19 OS=Haemophilus influenzae (strain PittGG) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 346 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 591 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84 The following BLAST results are available for this feature:
BLAST of CX070577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070577 ID=CX070577; Name=CX070577; organism=Citrus sinensis; type=EST; length=721bpback to top |