CX070577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PINKO (30S ribosomal protein S19, chloroplastic OS=Pinus koraiensis GN=rps19 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RSLKKNPFVANHLLRKI LN K EK+II+TWSRAS I+PAM+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHLLRKIKNLNIKKEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_DRIGR (30S ribosomal protein S19, chloroplastic OS=Drimys granadensis GN=rps19 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFV NHLL KI+KLN + EKEII+TWSRASTIIP M+GHTIAIHNG+ HLPIYI DRMVGHKLGEFAPT+ FRGHA+N+N SRR Sbjct: 1 MTRSLKKNPFVDNHLLGKIEKLNMREEKEIIVTWSRASTIIPTMIGHTIAIHNGKAHLPIYIIDRMVGHKLGEFAPTLTFRGHARNNNVSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_CUSEX (30S ribosomal protein S19, plastid OS=Cuscuta exaltata GN=rps19 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RSLKKNPFVA++L +KIDKLN KAEKEIIITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T NFRGHAK+DNRSRR Sbjct: 1 MARSLKKNPFVADNLFKKIDKLNIKAEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFASTFNFRGHAKSDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_NYMAL (30S ribosomal protein S19, chloroplastic OS=Nymphaea alba GN=rps19 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.913e-38 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RS KKNPFVANHLL KI+KLN E+ II+TWSRASTII AMVGHTIA+HNG+EHLPIYIT+RMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 1 MARSSKKNPFVANHLLSKIEKLNKAEERSIIVTWSRASTIIFAMVGHTIAVHNGKEHLPIYITERMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_LEMMI (30S ribosomal protein S19, chloroplastic OS=Lemna minor GN=rps19 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRS+KKNPFVANHLL KI+KLN + EKEII+TWSRASTIIP M+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT +F HA+ND +SRR Sbjct: 1 MTRSIKKNPFVANHLLVKIEKLNMRQEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTRSFGKHARNDIKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PICAB (30S ribosomal protein S19, chloroplastic OS=Picea abies GN=rps19 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.475e-38 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RSLKKNPFVANH LRKI LN K EK+II+TWSRAS I+PAM+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHSLRKIQNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PINTH (30S ribosomal protein S19, chloroplastic OS=Pinus thunbergii GN=rps19 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.107e-37 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RSLKKNPFVANH LRKI LN K EK+II+TWSRAS I+PAM+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHSLRKIKNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PHYPA (30S ribosomal protein S19, chloroplastic OS=Physcomitrella patens GN=rps19 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.107e-37 Identity = 71/92 (77.17%), Postives = 84/92 (91.30%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKK PFVA+HLL+KI+ LN K EK+IIITWSRASTI+P M+GHTIA++NG+EHLPIYITDRM+GHKLGEFAPT NFRGH K+D +SRR Sbjct: 1 MTRSLKKGPFVADHLLKKIEDLNLKKEKKIIITWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFAPTRNFRGHTKSDKKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_CUSGR (30S ribosomal protein S19, plastid OS=Cuscuta gronovii GN=rps19 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +T LKKNPFVAN+LL+KI+KLN KA+KEIIITWSR STIIP M+GHTIAIHNG+EHLPIYI D MVGHKLGEFA T+NFRGH K DN+SRR Sbjct: 1 MTYLLKKNPFVANNLLKKINKLNRKAQKEIIITWSRGSTIIPIMIGHTIAIHNGKEHLPIYIMDDMVGHKLGEFAATLNFRGHEKGDNKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_CUSRE (30S ribosomal protein S19, plastid OS=Cuscuta reflexa GN=rps19 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.493e-37 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 + RSLKKNPFVA +LL+KI KLN K EKEIIITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T+NFRGHAK DNRSRR Sbjct: 1 MARSLKKNPFVAKNLLKKIYKLNIKTEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFAFTLNFRGHAKTDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CX070577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070577 ID=CX070577; Name=CX070577; organism=Citrus sinensis; type=EST; length=721bpback to top |