CX070576

Overview
NameCX070576
Unique NameCX070576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML32_ARATH (Probable calcium-binding protein CML32 OS=Arabidopsis thaliana GN=CML32 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.429e-24
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE---LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 404
            F + D NKDGKIS  E A  +++   S   EE+  +  ++D D D  I ++E+ +          E E   ++EAFDLYD D +G ISA E+++VL RLG K ++  C+AM++ VDADGDG V+FEEF++MM+ + K
Sbjct:    7 FERVDKNKDGKISWDEFAEAIRAFSPSITSEEIDNMFREIDVDGDNQIDVAEYASCLMLGGEGNKEDEDIVMKEAFDLYDIDGDGKISASEIHVVLKRLGEKQTIAECIAMVRAVDADGDGFVSFEEFKTMMSCNNK 143          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.222e-23
Identity = 57/133 (42.86%), Postives = 87/133 (65.41%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 401
            F +FDAN DGKIS +ELA +L+S+GS   E E+  +ME+ D D DG++SL EF  +   ++  A   +L+ AF ++D+D NG ISA EL   L  +G  C+++    +I  VD +GDG ++ EEF++MMT+ +
Sbjct:   31 FKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQEFVDL---NNKGASVKDLKNAFKVFDRDCNGSISAAELCHTLESVGEPCTIEESKNIIHNVDKNGDGLISVEEFQTMMTSEM 160          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.791e-23
Identity = 56/132 (42.42%), Postives = 86/132 (65.15%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 398
            F++FD +KDGKIS TE   VL+++G     E++ ++ + +D D DGFI   EF    + S G    +++R +F  +D + +G ISAEE+  VL +LG +CS++ C  M++ VDADGDG VN EEF  MM+++
Sbjct:   55 FSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRS-SDIRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSSN 185          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 395
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D DG I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.441e-22
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE--LREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F  FD N DG I+  EL+  L+S+G    ++EL +++E +D + DG + + EF  + +T      E E  ++EAF+++DQ+ +G I+ +EL  VL+ LG+K   ++D C  MIK VD DGDG VN++EFR MM
Sbjct:   10 FQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.441e-22
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 395
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT+
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTS 148          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.441e-22
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 395
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMTT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML31_ARATH (Probable calcium-binding protein CML31 OS=Arabidopsis thaliana GN=CML31 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.457e-22
Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE----LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 398
            F   D NKDGKI   E A  ++        EE+ ++   LD D DG I   EF +    + G   + E    ++EAFDLYD D +G ISA E+++VL RLG K +++ CV M++ VD D DG VNFEEF+ MM ++
Sbjct:    5 FESVDKNKDGKILWDEFAEAIRVFSPQITSEEIDKMFIVLDVDGDGQIDDVEFASCLMVNGGGEKDTEEEVVMKEAFDLYDMDGDGKISASEIHVVLKRLGEKHTMEDCVVMVQTVDKDSDGFVNFEEFKIMMNSN 140          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 2.457e-22
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F+ FD + DG I+  EL TV++S+G +  E EL+ ++ ++D D +G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  V+  LG K S D    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22
Identity = 55/132 (41.67%), Postives = 86/132 (65.15%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F  FD N DGKI+  EL   L+++G    +++LV+++E +D + DG++ + EF  + +T      E E +REAF+++DQ+++G I+ EEL  VL  LG+K   +++ C  MI  VD DGDG VNF+EF+ MM
Sbjct:   10 FQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141          
The following BLAST results are available for this feature:
BLAST of CX070576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
CML32_ARATH3.429e-2442.34Probable calcium-binding protein CML32 OS=Arabidop... [more]
POLC2_JUNOX2.222e-2342.86Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2[more]
CML1_ARATH3.791e-2342.42Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
CALM_PYUSP1.103e-2243.94Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CML7_ARATH1.441e-2241.35Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CALM_SUBDO1.441e-2243.94Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_CAEEL1.441e-2243.94Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CML31_ARATH2.457e-2241.91Probable calcium-binding protein CML31 OS=Arabidop... [more]
CALM_BLAEM2.457e-2243.08Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CML3_ARATH3.209e-2241.67Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070576 ID=CX070576; Name=CX070576; organism=Citrus sinensis; type=EST; length=577bp
TCTTCAACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGGAG
CTGGCGACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAGCT
CGTCCGCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAGCC
TGTCGGAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAG
GCCGAGCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGCTT
GATTTCGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGT
GCTCGGTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCGATGGT
GATGGCAATGTGAATTTTGAAGAGTTTCGTTCGATGATGACTACTTCTCT
TAAACCTGGTCCTGCGCCGTAGATTTTGGTTTCGACGGTGATTCGATGGT
CGGCCGTACCGATATTAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTC
CGTGCCTACTTGTGTCTACTACTTTTAATGTTAATAAACTCTGATGCATT
TTCAATGGTTTAAAAAAAAAAAAAAAA
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