CX070575

Overview
NameCX070575
Unique NameCX070575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+ EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+ EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = -3
Query:  202 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF
Sbjct:   10 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 135          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA +   V+  LG K + +    MI+  D DGDG VN+EEF  MM
Sbjct:   17 FSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R       E E++EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  + EL  ++ ++D D +G I   EF T+  R       E E++EAF ++D+D NG ISA EL  V+  LG K +      MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = -3
Query:  202 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20
Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            FN FD + DG I+  EL TV+ S+G S  E EL +++E++D D  G I   EF   + R       E ++REAF ++D+D+NG I+ +EL  V+  LG   S D    M+   D+DGDG +N+ EF  +M
Sbjct:   16 FNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVM 145          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+ EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D+D +G I   EF ++  R       E EL EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
The following BLAST results are available for this feature:
BLAST of CX070575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
CALM_PYTSP2.357e-2040.77Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN2.357e-2040.77Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_ORYLA2.357e-2042.86Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_MOUSC2.357e-2040.77Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_EUGGR2.357e-2041.54Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_AGABI2.357e-2040.77Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALMA_ARBPU2.357e-2042.86Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CML2_ORYSJ3.079e-2040.00Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CALM_MACPY3.079e-2040.77Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_HETTR3.079e-2041.54Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070575 ID=CX070575; Name=CX070575; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAACCATTGAAAATGCATCAGAGTTTATTAACA
TTAAAAGTAGTAGACACAAGTAGGCACGGAGGAAAACGACAGCCTATAAA
CGGACGCAAGTTAATATCGGTACGGCCGACCATCGAATCACCGTCGAAAC
CAAAATCTACGGCGCAGGACCAGGTTTAAGAGAAGTAGTCATCATCGAAC
GAAACTCTTCAAAATTCACATTGCCATCACCATCGGCATCCACCGGCTTA
ATCATCGCCACACATCCATCAACCGAGCACTTAATTCCGAGCCTGTTCAA
CACCAAATTCAACTCCTCCGCCGAAATCAAGCCGTTCTTGTCCTGATCGT
AGAGATCAAACGCCTCGCGGAGCTCGGCCTCGCCGGCGGCACCAGAGGAG
GTCCGGCAGATCGTTTCGAACTCCGACAGGCTGATGAATCCGTCCTTGTC
GGTATCGAGATCCTCCATGACGCGGACGAGCTCCTCCTCTTTGTAGCTCG
ATCCCATTGATTTCAAAACGGTCGCCAGCTCCGTCAGCGAGATCTTGCCG
TCCTTGTTCGCGTCGAACTGGTTGAAGACCT
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