CX070575

Overview
NameCX070575
Unique NameCX070575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: MLR_PHYPO (Myosin regulatory light chain OS=Physarum polycephalum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  184 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA--ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 576
            F  FD + DGK+S+ EL + L+S+G +    EL  +   L+  +     L+ F+T+ R       E   E+ +AF   D++ NG I   EL  +L  LG   +      ++K V   GDG +N+E F  M+ T
Sbjct:   11 FQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CDC31_YEAST (Cell division control protein 31 OS=Saccharomyces cerevisiae GN=CDC31 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 39/133 (29.32%), Postives = 66/133 (49.62%), Query Frame = -3
Query:  181 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA-ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 576
            F+ FD N DG +   EL   +K++G    + E++ ++++ D++    +   +F  +            E++ AF L+D D  G IS + L  V   LG   + +   AMI+  D DGDG +N  EF ++ T S
Sbjct:   29 FSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CABP2_MOUSE (Calcium-binding protein 2 OS=Mus musculus GN=Cabp2 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ +D +GDG V+FEEF  MM+
Sbjct:   83 FQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRMMS 215          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CABP2_BOVIN (Calcium-binding protein 2 OS=Bos taurus GN=CABP2 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ +D +GDG V+FEEF  MM+
Sbjct:   30 FQEFDRDRDGYIGYQELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGCISLGELRAALKALLGERLSQREVDEILRDIDLNGDGLVDFEEFVRMMS 162          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML29_ORYSJ (Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica GN=CML29 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11
Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = -3
Query:  193 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSS---GAAGEAELREAFDLYDQ--DKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSM 576
            F  FD++ DG ++  EL  +L S+G    E E+  ++   D D+DG +S+ E   +        GA G A L+ A    +     +G++ A+EL  +L+ +G   SV+ C+ +I  +D DGDG ++ EEFR M
Sbjct:   36 FQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLARADADRDGKLSVEELLDVMNAGQLGLGALG-ALLQSAVPALESAAGPDGVLGADELARLLSVMG-TASVEDCMEIIACMDGDGDGAISVEEFRLM 166          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11
Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELAT----VLKSMGSSYK-------EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            +F + D N DG++   EL      +LK  G           E E+ +++  +D D++G+I  SEF T+            L +AF L+D+D +G ISA EL  +     +  S +    ++K VD + DG ++F+EFR M+
Sbjct:  384 IFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVSIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFGLSDV--SSECWKTVLKEVDQNNDGEIDFKEFRDML 522          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CABP2_HUMAN (Calcium-binding protein 2 OS=Homo sapiens GN=CABP2 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ VD +GDG V+FEEF  MM+
Sbjct:   87 FQEFDRDQDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMS 219          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 40/127 (31.50%), Postives = 65/127 (51.18%), Query Frame = -3
Query:  199 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 579
            +F + D NKDG I + +LA  LK +G    E EL ++++  D D+DG +   EF    R       E +LR  F   D+  +G I A+E+   L  LG+  S      ++K +D +G   +++ E+R
Sbjct:   64 LFQELDVNKDGAICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFDEFVHYLRDH-----EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEWR 185          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: POLC3_SYRVU (Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -3
Query:  391 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG 579
            +F +FDAN DGKIS +EL   LK++GS    EE+ R+M ++DTD DGFIS  EF+   R +SG
Sbjct:   11 IFKRFDANGDGKISSSELGETLKTLGS-VTPEEIQRMMAEIDTDGDGFISFEEFKDFARANSG 72          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            +F   D +  G I+  EL   L+  GS+ K+ E+  +ME  D D  G I  SEF       +    E  L  AF  +D+D +G I+ +EL       G+         +IK VD D DG +++EEF +MM
Sbjct:  394 MFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGMTDVF--LEDIIKEVDQDNDGRIDYEEFVAMM 521          
The following BLAST results are available for this feature:
BLAST of CX070575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
MLR_PHYPO5.820e-1131.58Myosin regulatory light chain OS=Physarum polyceph... [more]
CDC31_YEAST5.820e-1129.32Cell division control protein 31 OS=Saccharomyces ... [more]
CABP2_MOUSE5.820e-1132.09Calcium-binding protein 2 OS=Mus musculus GN=Cabp2... [more]
CABP2_BOVIN5.820e-1132.09Calcium-binding protein 2 OS=Bos taurus GN=CABP2 P... [more]
CML29_ORYSJ7.601e-1133.08Probable calcium-binding protein CML29 OS=Oryza sa... [more]
CDPK4_PLAF77.601e-1130.50Calcium-dependent protein kinase 4 OS=Plasmodium f... [more]
CABP2_HUMAN7.601e-1132.84Calcium-binding protein 2 OS=Homo sapiens GN=CABP2... [more]
SCMC2_XENLA9.927e-1131.50Calcium-binding mitochondrial carrier protein SCaM... [more]
POLC3_SYRVU9.927e-1152.38Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=... [more]
CDPK6_ARATH9.927e-1133.08Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070575 ID=CX070575; Name=CX070575; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAACCATTGAAAATGCATCAGAGTTTATTAACA
TTAAAAGTAGTAGACACAAGTAGGCACGGAGGAAAACGACAGCCTATAAA
CGGACGCAAGTTAATATCGGTACGGCCGACCATCGAATCACCGTCGAAAC
CAAAATCTACGGCGCAGGACCAGGTTTAAGAGAAGTAGTCATCATCGAAC
GAAACTCTTCAAAATTCACATTGCCATCACCATCGGCATCCACCGGCTTA
ATCATCGCCACACATCCATCAACCGAGCACTTAATTCCGAGCCTGTTCAA
CACCAAATTCAACTCCTCCGCCGAAATCAAGCCGTTCTTGTCCTGATCGT
AGAGATCAAACGCCTCGCGGAGCTCGGCCTCGCCGGCGGCACCAGAGGAG
GTCCGGCAGATCGTTTCGAACTCCGACAGGCTGATGAATCCGTCCTTGTC
GGTATCGAGATCCTCCATGACGCGGACGAGCTCCTCCTCTTTGTAGCTCG
ATCCCATTGATTTCAAAACGGTCGCCAGCTCCGTCAGCGAGATCTTGCCG
TCCTTGTTCGCGTCGAACTGGTTGAAGACCT
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