CX070575

Overview
NameCX070575
Unique NameCX070575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  187 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.633e-21
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R  +    E E+REAF ++D+D NG ISA EL  V+  LG K S +    MI+  D DGDG VN++EF  MM
Sbjct:   17 FSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMM 146          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.132e-21
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF  FD + DGKI+  EL    K++G    E+EL ++++ +D + DG + + EF    +TI        GE +++EAF+++D++ +G I+ +EL  VL+ LG+K   +++ C  MI  VD DGDG VN+ EFR MM
Sbjct:    9 VFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMM 144          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.132e-21
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
The following BLAST results are available for this feature:
BLAST of CX070575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
CALM_HUMAN9.571e-2243.51Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA9.571e-2243.51Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE9.571e-2243.51Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID9.571e-2243.51Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK9.571e-2243.51Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN9.571e-2243.51Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL9.571e-2243.51Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALM_PHYPO1.633e-2143.08Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CML6_ARATH2.132e-2138.97Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]
CALM_LUMRU2.132e-2143.08Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070575 ID=CX070575; Name=CX070575; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAACCATTGAAAATGCATCAGAGTTTATTAACA
TTAAAAGTAGTAGACACAAGTAGGCACGGAGGAAAACGACAGCCTATAAA
CGGACGCAAGTTAATATCGGTACGGCCGACCATCGAATCACCGTCGAAAC
CAAAATCTACGGCGCAGGACCAGGTTTAAGAGAAGTAGTCATCATCGAAC
GAAACTCTTCAAAATTCACATTGCCATCACCATCGGCATCCACCGGCTTA
ATCATCGCCACACATCCATCAACCGAGCACTTAATTCCGAGCCTGTTCAA
CACCAAATTCAACTCCTCCGCCGAAATCAAGCCGTTCTTGTCCTGATCGT
AGAGATCAAACGCCTCGCGGAGCTCGGCCTCGCCGGCGGCACCAGAGGAG
GTCCGGCAGATCGTTTCGAACTCCGACAGGCTGATGAATCCGTCCTTGTC
GGTATCGAGATCCTCCATGACGCGGACGAGCTCCTCCTCTTTGTAGCTCG
ATCCCATTGATTTCAAAACGGTCGCCAGCTCCGTCAGCGAGATCTTGCCG
TCCTTGTTCGCGTCGAACTGGTTGAAGACCT
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