CX070575 | Citrus Genome Database

Overview


Name	CX070575
Unique Name	CX070575
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	581

Libraries


Library Name	Type
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_EMENI (Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_COLGL (Calmodulin OS=Colletotrichum gloeosporioides PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_ASPOR (Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

[Close]

BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CALM_AJECG (Calmodulin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=CAM1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = -3

Query:  190 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 576
            F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146

The following BLAST results are available for this feature:

BLAST of CX070575 vs. ExPASy Swiss-Prot

BLAST of CX070575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310


Match Name	E-value	Identity	Description
CALM_TRYCR	6.204e-21	41.54	Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2	[more]
CALM_TRYBG	8.102e-21	40.77	Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV...	[more]
CALM_TRYBB	8.102e-21	40.77	Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2	[more]
CALM_NEUCR	8.102e-21	40.00	Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2	[more]
CALM_MAGGR	8.102e-21	40.00	Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4	[more]
CALM_EMENI	8.102e-21	40.00	Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=...	[more]
CALM_COLTR	8.102e-21	40.00	Calmodulin OS=Colletotrichum trifolii PE=3 SV=2	[more]
CALM_COLGL	8.102e-21	40.00	Calmodulin OS=Colletotrichum gloeosporioides PE=2 ...	[more]
CALM_ASPOR	8.102e-21	40.00	Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2	[more]
CALM_AJECG	8.102e-21	40.00	Calmodulin OS=Ajellomyces capsulata (strain ATCC 2...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS08_17F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-4.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX070575 ID=CX070575; Name=CX070575; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAACCATTGAAAATGCATCAGAGTTTATTAACA
TTAAAAGTAGTAGACACAAGTAGGCACGGAGGAAAACGACAGCCTATAAA
CGGACGCAAGTTAATATCGGTACGGCCGACCATCGAATCACCGTCGAAAC
CAAAATCTACGGCGCAGGACCAGGTTTAAGAGAAGTAGTCATCATCGAAC
GAAACTCTTCAAAATTCACATTGCCATCACCATCGGCATCCACCGGCTTA
ATCATCGCCACACATCCATCAACCGAGCACTTAATTCCGAGCCTGTTCAA
CACCAAATTCAACTCCTCCGCCGAAATCAAGCCGTTCTTGTCCTGATCGT
AGAGATCAAACGCCTCGCGGAGCTCGGCCTCGCCGGCGGCACCAGAGGAG
GTCCGGCAGATCGTTTCGAACTCCGACAGGCTGATGAATCCGTCCTTGTC
GGTATCGAGATCCTCCATGACGCGGACGAGCTCCTCCTCTTTGTAGCTCG
ATCCCATTGATTTCAAAACGGTCGCCAGCTCCGTCAGCGAGATCTTGCCG
TCCTTGTTCGCGTCGAACTGGTTGAAGACCT