CX070574

Overview
NameCX070574
Unique NameCX070574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21
Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 1
Query:    4 KYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 402
            +Y +QGT LL    K I +  ++   ++VEAH ++P   +L  + +F   +G   D+ +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+ +KVL
Sbjct:   78 RYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKK-LFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 1
Query:    7 YRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 405
            Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   78 YADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 1
Query:    7 YRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 402
            Y  +G +L+    ++   +   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  DI++RPS KKVL
Sbjct:   79 YSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.416e-20
Identity = 52/133 (39.10%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 KYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 402
            ++  +G  LL  T ++  ++   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  DI++RPS +KVL
Sbjct:   78 EFSDKGNNLLS-TGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.154e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 1
Query:   10 RSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 405
            R    ELLG   +E+  +V+ WLEVEAH  +P    + ++ +F+   GR  ++ +V E+ EKL K L+VYE RL+   YLAGDF SLADLS     H L+       ++    HVSAWW  ++ RP+  KV +
Sbjct:   79 RKHKPELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMA-TEYAALVHALPHVSAWWQGLAARPAANKVAQ 210          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.119e-20
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 1
Query:    7 YRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 405
            Y   G +L+ +  ++   +  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   78 YADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 1
Query:   19 GTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 423
            G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  + ADL+HIPFT Y +  P  +  +  D   V AWW+ +  RP+ ++V +   T F
Sbjct:   84 GLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAK--VFDDYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.576e-18
Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 1
Query:   19 GTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTPF 423
            G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  S ADL+HIPFT Y +  P  +  +  +   V AWW+ +  RP+ ++V +   T F
Sbjct:   84 GLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAK--VFDEYPKVKAWWEMLMARPAVQRVCKHMPTEF 223          
BLAST of CX070574 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.569e-11
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 1
Query:   16 QGTELLGKTIEER--GLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ---HMIRDRKHVSAWW 363
            +G+ LL    + +  GL EQ   VE  +++P    L  + +F+   G   +E+L K+  + L   +D YE  LSK KYLAG+ F+LADL H+P+     G M  Q    ++  + HV AWW
Sbjct:   83 KGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLPY-----GAMVAQLEPTVLDSKPHVKAWW 198          
The following BLAST results are available for this feature:
BLAST of CX070574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GST16_ARATH4.866e-2138.97Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF2_TOBAC8.300e-2139.85Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GST11_ARATH1.084e-2039.39Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_ARATH1.416e-2039.10Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF4_MAIZE3.154e-2040.60Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_TOBAC4.119e-2039.10Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_WHEAT5.035e-1840.14Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT6.576e-1840.14Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH1.569e-1135.54Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F06-K11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070574 ID=CX070574; Name=CX070574; organism=Citrus sinensis; type=EST; length=587bp
GAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGTAAAACAATTGAAGA
AAGAGGCCTGGTGGAACAGTGGCTAGAAGTAGAGGCACACAACTACAACC
CAGCAATTTACGAGCTGACCATCCAACTTTTATTTTCCTCCAAGTTTGGA
CGTCCCGTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAA
AACGCTCGACGTTTACGAGGAGAGGCTGTCGAAGAGCAAGTATTTGGCTG
GTGATTTCTTCAGCCTGGCTGATCTGAGTCACATTCCATTTACCCACTAC
TTGGTTGGGCCGATGGGGAGACAGCATATGATTAGAGACAGGAAGCATGT
GAGTGCCTGGTGGGATGATATTAGCAACAGGCCGTCCTGGAAGAAAGTCC
TTGAGCTCTGTAAGACTCCTTTCGGCTGAGCTTGATTGTATGTGTTTCAA
TTTTCGGGCTTGTGTTTTACTTCTCTACTACTTGGTTTGTTTCTGTCTGT
GGGATATGTTTCTTGCATATGTGTGTTTCAAATAAATAAATGTTTGGAGT
TGGAGCTTTTTTTTTTNNNANAAAAAAAAAAAAAAAA
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