CX070572

Overview
NameCX070572
Unique NameCX070572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_CERDE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Ceratophyllum demersum GN=ndhK PE=3 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 2.231e-83
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L DRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGT+TMKMAPSLVRLYEQMP+PKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLFDRTTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTITMKMAPSLVRLYEQMPKPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_SOYBN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Glycine max GN=ndhK PE=2 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 2.914e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLD+TT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDQTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LACSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lactuca sativa GN=ndhK PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.914e-83
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L DRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFPLFDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_FAGEA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=ndhK PE=3 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.806e-83
Identity = 152/158 (96.20%), Postives = 153/158 (96.84%), Query Frame = -1 
Query:   10 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKIS 483
            MNS+EF  LDR TPNS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKIS
Sbjct:    1 MNSVEFLPLDRITPNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIS 158
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_CALFG (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Calycanthus floridus var. glaucus GN=ndhK PE=3 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.806e-83
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNS EF LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSTEFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OENPA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera parviflora GN=ndhK PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.971e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF+LL R T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFTLLARRTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OENGL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana GN=ndhK PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.971e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF+LL R T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFTLLARRTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OENEH (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhK PE=3 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 4.971e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF+LL R T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFTLLARRTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OENBI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis GN=ndhK PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.971e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF+LL R T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFTLLARRTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OENAR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola GN=ndhK PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.971e-83
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF+LL R T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFTLLARRTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
The following BLAST results are available for this feature:
BLAST of CX070572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_CERDE2.231e-8394.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SOYBN2.914e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LACSA2.914e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_FAGEA3.806e-8396.20NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CALFG3.806e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OENPA4.971e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OENGL4.971e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OENEH4.971e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OENBI4.971e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OENAR4.971e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F05-K9-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070572 ID=CX070572; Name=CX070572; organism=Citrus sinensis; type=EST; length=708bp
CCCCCCTCGAGATATTTTCTTACGAAGTTTTTTTATGGCATCTATAACGG
CCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACATCCACGGGAATTAGC
TTATCAACTCCTCGAACAGTACTATACGAATCGGTACTGAACATCCCCCC
TGTAATTGTACATGCTCCCATAGCAATAACATATTTTGGTTCAGGCATTT
GTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACTGTACCA
GCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGATCTTGGTACCAGCCC
ATAACGGTCAAAATCGAACCGCGAGCCGATTAATGAAGCAAATTCAATGA
AACAACAACTGGTACCATAAAGAAGCGGCCATAAGCTGGAGAGTCTTGAC
CAATTTGAAAGATCGTTTGATGTAGTTGAAATAAATGAATTTGGGGTTGT
TCGATCAAGTAAGGAAAATTCAATAGAATTCATAATTCTCTCAATGTTAT
TTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTATTGTCTGAATATTCA
GAAACTAAGACCACTCTAATGCTCCTTTTCGCCACGCATAAACTAAACCA
ACAATTAGGATAAGCATGAAAATGAAAGCTTCTATAAATACGGGTACCCC
CAATACATCAAAACTCATTGCCCATGGATAAAGAAAAACGGTTTCAACAT
CAAAAACA
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