CX070572

Overview
NameCX070572
Unique NameCX070572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_NICTO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nicotiana tomentosiformis GN=ndhK PE=3 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 6.492e-83
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIQFPLLDRTAQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LOTJA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lotus japonicus GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.492e-83
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L+DRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPE+++DAI KLRKKISR
Sbjct:    1 MNSIEFPLIDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPESILDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ATRBE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Atropa belladonna GN=ndhK PE=3 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 6.492e-83
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIQFPLLDRTAQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_PHAVU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phaseolus vulgaris GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.479e-83
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLD+TT NS ISTT ND SNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDQTTQNSVISTTLNDFSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_IPOPU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Ipomoea purpurea GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.479e-83
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIQFPLLDRTAKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ARATH (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Arabidopsis thaliana GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.479e-83
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPILDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_PEA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Pisum sativum GN=ndhK PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLD+ T NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDQKTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_OLIPU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Olimarabidopsis pumila GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_NASOF (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nasturtium officinale GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LOBMA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lobularia maritima GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
The following BLAST results are available for this feature:
BLAST of CX070572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_NICTO6.492e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LOTJA6.492e-8394.34NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ATRBE6.492e-8395.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PHAVU8.479e-8394.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_IPOPU8.479e-8394.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ARATH8.479e-8394.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PEA1.107e-8295.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_OLIPU1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NASOF1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LOBMA1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F05-K9-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070572 ID=CX070572; Name=CX070572; organism=Citrus sinensis; type=EST; length=708bp
CCCCCCTCGAGATATTTTCTTACGAAGTTTTTTTATGGCATCTATAACGG
CCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACATCCACGGGAATTAGC
TTATCAACTCCTCGAACAGTACTATACGAATCGGTACTGAACATCCCCCC
TGTAATTGTACATGCTCCCATAGCAATAACATATTTTGGTTCAGGCATTT
GTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACTGTACCA
GCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGATCTTGGTACCAGCCC
ATAACGGTCAAAATCGAACCGCGAGCCGATTAATGAAGCAAATTCAATGA
AACAACAACTGGTACCATAAAGAAGCGGCCATAAGCTGGAGAGTCTTGAC
CAATTTGAAAGATCGTTTGATGTAGTTGAAATAAATGAATTTGGGGTTGT
TCGATCAAGTAAGGAAAATTCAATAGAATTCATAATTCTCTCAATGTTAT
TTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTATTGTCTGAATATTCA
GAAACTAAGACCACTCTAATGCTCCTTTTCGCCACGCATAAACTAAACCA
ACAATTAGGATAAGCATGAAAATGAAAGCTTCTATAAATACGGGTACCCC
CAATACATCAAAACTCATTGCCCATGGATAAAGAAAAACGGTTTCAACAT
CAAAAACA
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