CX070572

Overview
NameCX070572
Unique NameCX070572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LEPVR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lepidium virginicum GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTTNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_BARVE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Barbarea verna GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ARAHI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Arabis hirsuta GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_AETCO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Aethionema cordifolium GN=ndhK PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.107e-82
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_MORIN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Morus indica GN=ndhK PE=3 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.446e-82
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = -1 
Query:    7 MNSI-EFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI EF LLDRTT NS ISTTS+DLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 160
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_EUCGG (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhK PE=3 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.446e-82
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LL RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKI+R
Sbjct:    1 MNSIEFPLLARTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_CHLSC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Chloranthus spicatus GN=ndhK PE=3 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.446e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L +RT  NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRK++SR
Sbjct:    1 MNSIEFPLFERTAQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKRVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_HELAN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Helianthus annuus GN=ndhK PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.889e-82
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L  RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFPLFHRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_GUIAB (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Guizotia abyssinica GN=ndhK PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.889e-82
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L  RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKKISR
Sbjct:    1 MNSIEFPLFHRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_JASNU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Jasminum nudiflorum GN=ndhK PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.467e-82
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLD+T  NS  STT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDQTVQNSVFSTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
The following BLAST results are available for this feature:
BLAST of CX070572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_LEPVR1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_BARVE1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ARAHI1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_AETCO1.107e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_MORIN1.446e-8296.25NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_EUCGG1.446e-8295.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CHLSC1.446e-8294.34NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_HELAN1.889e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_GUIAB1.889e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_JASNU2.467e-8294.97NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F05-K9-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070572 ID=CX070572; Name=CX070572; organism=Citrus sinensis; type=EST; length=708bp
CCCCCCTCGAGATATTTTCTTACGAAGTTTTTTTATGGCATCTATAACGG
CCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACATCCACGGGAATTAGC
TTATCAACTCCTCGAACAGTACTATACGAATCGGTACTGAACATCCCCCC
TGTAATTGTACATGCTCCCATAGCAATAACATATTTTGGTTCAGGCATTT
GTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACTGTACCA
GCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGATCTTGGTACCAGCCC
ATAACGGTCAAAATCGAACCGCGAGCCGATTAATGAAGCAAATTCAATGA
AACAACAACTGGTACCATAAAGAAGCGGCCATAAGCTGGAGAGTCTTGAC
CAATTTGAAAGATCGTTTGATGTAGTTGAAATAAATGAATTTGGGGTTGT
TCGATCAAGTAAGGAAAATTCAATAGAATTCATAATTCTCTCAATGTTAT
TTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTATTGTCTGAATATTCA
GAAACTAAGACCACTCTAATGCTCCTTTTCGCCACGCATAAACTAAACCA
ACAATTAGGATAAGCATGAAAATGAAAGCTTCTATAAATACGGGTACCCC
CAATACATCAAAACTCATTGCCCATGGATAAAGAAAAACGGTTTCAACAT
CAAAAACA
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