CX070572

Overview
NameCX070572
Unique NameCX070572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_HORVU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Hordeum vulgare GN=ndhK PE=1 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 5.496e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MN IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKISR
Sbjct:    1 MNLIEFPLLDQTSSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_AETGR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Aethionema grandiflora GN=ndhK PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.496e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLR KI+R
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRTKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LEMMI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lemna minor GN=ndhK PE=3 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.178e-82
Identity = 150/159 (94.34%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MN IEF  LD+T PNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFA+LIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNLIEFPSLDQTMPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFAALIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_BRADI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Brachypodium distachyon GN=ndhK PE=3 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 1.599e-81
Identity = 149/159 (93.71%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKISR
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_SORBI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Sorghum bicolor GN=ndhK PE=3 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.562e-81
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKI+R
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_SACOF (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Saccharum officinarum GN=ndhK PE=3 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.562e-81
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKI+R
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_SACHY (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Saccharum hybrid GN=ndhK PE=3 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.562e-81
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKI+R
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_MAIZE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Zea mays GN=ndhK PE=2 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 4.652e-81
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKI+R
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKIAR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_TRACE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trachelium caeruleum GN=ndhK PE=5 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.076e-81
Identity = 148/159 (93.08%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M SI+F LL+R T NS ISTT N+LSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKL+PVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MTSIDFPLLNRRTQNSVISTTPNELSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLLPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ORYSJ (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhK PE=3 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.036e-80
Identity = 148/159 (93.08%), Postives = 152/159 (95.60%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            M+ IEF LLD+T+ NS ISTT  DLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDA+ KLRKKISR
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTLKDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISR 159
The following BLAST results are available for this feature:
BLAST of CX070572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_HORVU5.496e-8294.34NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_AETGR5.496e-8294.34NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LEMMI7.178e-8294.34NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_BRADI1.599e-8193.71NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SORBI3.562e-8193.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SACOF3.562e-8193.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SACHY3.562e-8193.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_MAIZE4.652e-8193.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_TRACE6.076e-8193.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ORYSJ1.036e-8093.08NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F05-K9-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070572 ID=CX070572; Name=CX070572; organism=Citrus sinensis; type=EST; length=708bp
CCCCCCTCGAGATATTTTCTTACGAAGTTTTTTTATGGCATCTATAACGG
CCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACATCCACGGGAATTAGC
TTATCAACTCCTCGAACAGTACTATACGAATCGGTACTGAACATCCCCCC
TGTAATTGTACATGCTCCCATAGCAATAACATATTTTGGTTCAGGCATTT
GTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACTGTACCA
GCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGATCTTGGTACCAGCCC
ATAACGGTCAAAATCGAACCGCGAGCCGATTAATGAAGCAAATTCAATGA
AACAACAACTGGTACCATAAAGAAGCGGCCATAAGCTGGAGAGTCTTGAC
CAATTTGAAAGATCGTTTGATGTAGTTGAAATAAATGAATTTGGGGTTGT
TCGATCAAGTAAGGAAAATTCAATAGAATTCATAATTCTCTCAATGTTAT
TTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTATTGTCTGAATATTCA
GAAACTAAGACCACTCTAATGCTCCTTTTCGCCACGCATAAACTAAACCA
ACAATTAGGATAAGCATGAAAATGAAAGCTTCTATAAATACGGGTACCCC
CAATACATCAAAACTCATTGCCCATGGATAAAGAAAAACGGTTTCAACAT
CAAAAACA
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