CX070535

Overview
NameCX070535
Unique NameCX070535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070535 vs. ExPASy Swiss-Prot
Match: H2AZ_SCHPO (Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = -3 
Query:  157 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 324
            +VLELAGNAA+D K  RI PRH+QLA+R DEEL  L+   TIA GGVLP+I++ LL
Sbjct:   72 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAGGGVLPHINKQLL 126
The following BLAST results are available for this feature:
BLAST of CX070535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
H2AZ_SCHPO2.493e-1164.29Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17D04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17D04-G7-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070535 ID=CX070535; Name=CX070535; organism=Citrus sinensis; type=EST; length=884bp
TAGCAAATGCAATCTCTGTTACCATAAGAAAAAAACTCATAACCATTTTT
CTTTTTGTCCTTTTTTACAGATACTAGTAAAATTCTGACAGAGCAGAGTC
TAGAACTCTTGAGAAGCAGAACCAATGTCACCCTTTCCTTTCCCCATCTT
CTTGGGAAGCAGCGTCTGGTGAATGTTGGGTAAAACACCTCCATTGGCAA
TGGTAACCGAGCCCAGCAGCTTGCTCAATTCCTCATCATTTCGAACTGCA
AGCTGAATATGCCTTGGCACTATACGGTTCTTCTTGTTGTCCCTTGCTGC
ATTGCCAGCAAGCTCCAGAACCTGTAGATTGAAACACATAAAATCATTTC
CCATATTACAAGGCTGGAAAAATCACAATCTTGAACCATTTAATCAGTTT
CAAGAAACAATTTTTGAAGTATCAATAAGCAAACAGCTTTAATTCTTCTT
CACCATCAGTGCTTAAGAATCAATTAATCTAATTATATAATCCCAGTTCT
ATTTGTTTTGATGAAGAAATGTTTAAGACCCACTTAAAAAATAAAAAAAT
ATTAATCAATTTCCAAGAAACAATTTTGAAAAAAAAACTGACATTTGAAG
TATCAACAAGTAAACAGCCGTACTTAAGAATAAAATAATCCAAAAAAACA
TAATTTCTGTTGTATTTGTTTTCATGAAGAAATGATTAAGACACCTTTAA
AAAATAAAAAATTTACCACTGAGAAGCAAATTTCACAAATTCAAAGTTCA
ATTCAATCAAACCCTAATTTCATTATCAGGCAATAATAAAACAAACAAAC
AAACCTCAGCAGCGAGGTACTCAAGCACGGCAGAGAGGTAAACAGGAGCT
CCGGCGCCGACTCGCTCAGCGTACTTTCCGGCCT
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