CX070530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 +IETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS Sbjct: 47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B10_ARATH (Histone H2B.10 OS=Arabidopsis thaliana GN=At5g22880 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 90/102 (88.24%), Postives = 93/102 (91.18%), Query Frame = 3 Query: 189 GDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 GD ++ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 44 GDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B2_SOLLC (Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 SIETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 49 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESSRLARYNKKPTITSREIQTAVRLVLPGELAKH VSEGTKAVTKFTSS Sbjct: 57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHDVSEGTKAVTKFTSS 148
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43 Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 491 S+ETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 48 SVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B1_SOLLC (Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=2 SV=4) HSP 1 Score: 172.94 bits (437), Expect = 1.463e-42 Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S+ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 51 SVETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSN 142
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSJ (Histone H2B.11 OS=Oryza sativa subsp. japonica GN=H2B.11 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42 Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S+ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 48 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSI (Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2B.11 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42 Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S+ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 48 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
BLAST of CX070530 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSJ (Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H2B1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42 Identity = 86/92 (93.48%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 219 SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 494 S+ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN 152 The following BLAST results are available for this feature:
BLAST of CX070530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070530 ID=CX070530; Name=CX070530; organism=Citrus sinensis; type=EST; length=710bpback to top |