CX070525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 2.013e-92 Identity = 164/202 (81.19%), Postives = 184/202 (91.09%), Query Frame = -1 Query: 230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832 GHF L++SDYPS+R++IVGSITGN+NTLAGNVPPKA+LGDLRG AGGL+G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++PSLTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 187 GHFLLARLLMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKASLGDLRGLAGGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORA_HORVU (Protochlorophyllide reductase A, chloroplastic OS=Hordeum vulgare GN=PORA PE=1 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 9.992e-92 Identity = 163/202 (80.69%), Postives = 183/202 (90.59%), Query Frame = -1 Query: 230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832 GHF L++SDYPS+R++IVGSITGN+NTLAGNVPPKA+LGDLRG AGGL+G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++P LTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 187 GHFLLARLLMEDLQKSDYPSRRMVIVGSITGNSNTLAGNVPPKASLGDLRGLAGGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_MARPA (Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.651e-86 Identity = 152/200 (76.00%), Postives = 174/200 (87.00%), Query Frame = -1 Query: 233 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGL 832 GHF L+++ KR+IIVGSITGN+NT+AGNVPPKANLG LRG AGGLNG+NSSSMIDGG+FDGAKAYKDSKVCNM TMQEFHRR+H ETGI F+SLYPGCIA TGLFR H+ LFR LFPPFQKYITKGYVSE+EAGKR+AQVVSDP L+KSGVYWSWNKDS SFEN+LS+EAS+ EKA+++WE+SE+L GL Sbjct: 258 GHFLLARLLMEDLQKAKDSLKRMIIVGSITGNSNTVAGNVPPKANLGHLRGLAGGLNGVNSSSMIDGGEFDGAKAYKDSKVCNMFTMQEFHRRYHAETGITFSSLYPGCIAETGLFRNHVTLFRTLFPPFQKYITKGYVSEEEAGKRMAQVVSDPKLSKSGVYWSWNKDSGSFENELSEEASNPEKAKRLWELSERLSGL 457
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 8.795e-72 Identity = 131/201 (65.17%), Postives = 156/201 (77.61%), Query Frame = -1 Query: 230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832 GHF LK + R IIVGSITGNTNTLAGNVPPKANLGDL G A G+ N M+DG +F+GAKAYKDSKV M+T+++ H+RFH+ TGI FASLYPGCIA TGLFREH+PLF+ LFPPFQKYITKGYVSE+EAG+RLA V+SDP L KSG YWSW+ + SF+NQ+S+E +D KA K+W+IS KLVGL+ Sbjct: 198 GHFLLTNLLLDDLKNAPNKQPRCIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGVPAANP--MMDGQEFNGAKAYKDSKVACMMTVRQMHQRFHDATGITFASLYPGCIAETGLFREHVPLFKTLFPPFQKYITKGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISAKLVGLS 396
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_PLEBO (Light-dependent protochlorophyllide reductase OS=Plectonema boryanum GN=por PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.017e-51 Identity = 103/207 (49.76%), Postives = 137/207 (66.18%), Query Frame = -1 Query: 230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVP--PKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW----NKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832 GHF LK S + RLII+G++T N+ L G +P A+LGDL G G +MIDG F KAYKDSK+CNM+T +E HRR+H+ TGI F +LYPGC+A T LFR +P+F+ +FP FQK IT GYVS++ AG+R AQVV+DP +SGV+WSW + SF +LS++ +D KA+++WE+SEKLVGLA Sbjct: 118 GHFLLCNLLLEDLKHSTHNDPRLIILGTVTANSKELGGKIPIPAPADLGDLSGLEAGFKA--PIAMIDGKPFKAGKAYKDSKLCNMITSRELHRRYHDSTGIVFNTLYPGCVADTPLFRNSLPVFQKVFPWFQKNITGGYVSQELAGERTAQVVADPEFKQSGVHWSWGNRQKEGRESFVQELSEKVTDDAKAKRMWELSEKLVGLA 322
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_SYNY3 (Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803) GN=por PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.460e-50 Identity = 104/206 (50.49%), Postives = 136/206 (66.02%), Query Frame = -1 Query: 233 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKA--NLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW-NKDSA---SFENQLSQEASDVEKARKVWEISEKLVGL 832 GHF LK KRLII+G++T N+ L G +P A +LG+ GF G +MI+ F KAYKDSK+CNMLT +E HRRFH+ETGI F SLYPGC+A T LFR H LFR +FP FQK +TKGYVS++ AG+R+A VV+D SGV+WSW N+ A +F +LS++ SD +KA+++W++SEKLVGL Sbjct: 118 GHFLLCNLLLEDLKACPDADKRLIILGTVTANSKELGGKIPIPAPPDLGNFEGFEAGFK--KPIAMINNKKFKSGKAYKDSKLCNMLTTRELHRRFHQETGIVFNSLYPGCVADTPLFRNHYSLFRTIFPWFQKNVTKGYVSQELAGERVAMVVADDKFKDSGVHWSWGNRQQAGREAFVQELSEQGSDAQKAQRMWDLSEKLVGL 321 The following BLAST results are available for this feature:
BLAST of CX070525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070525 ID=CX070525; Name=CX070525; organism=Citrus sinensis; type=EST; length=832bpback to top |