DR404425

Overview
NameDR404425
Unique NameDR404425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404425 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 36/112 (32.14%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  356 DHVKALCVDFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESFRIHPPIPLISRKAVEDCKI-GNYVIPKDTVLFVNLWSMGR 688
            D V  + + F+ AG DT+S +L W    L  +P V +E   EL +   ++ L+   +V  + Y  A + ES R++PP+P+ S++AV D  +   +V+ K T++  ++++MGR
Sbjct:  303 DFVADIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVNELSK---KSELMVYDEVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPDGWVVKKGTIVTYHVYAMGR 411          
BLAST of DR404425 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  326 NQNS-EIKLTRDH-VKALCVDFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESFRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDP 694
            NQN  + K   DH + +  + F+ AG +T+S+SL +    L  +P V+++ Q+E+D        VQ   +  + Y+  ++ ES R++P    + R A    ++   VIPKD V+ V  W + RDP
Sbjct:  282 NQNGLQDKGLSDHEILSQAMIFIFAGYETTSSSLTFLAYNLATNPEVMKKLQKEIDATFPNKAPVQYVPLMEMEYLDCVVNESLRLYPIAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDP 406          
The following BLAST results are available for this feature:
BLAST of DR404425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
C94A1_VICSA8.306e-1132.14Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C340_ORYLA8.306e-1131.20Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243E14 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243E14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404425 ID=DR404425; Name=DR404425; organism=Citrus sinensis; type=EST; length=696bp
GGGATTGTTGAGATTTGCAAACAATATAATATCTCAAATGATGTTGAGCA
TTAGATGTTCAGGAAAGGGGGGCCAGGCTGAAGAGTGTAGAACCCTGGCT
CGTGAAGTGACTGAAATTTTTGGCGAGTTTAATATCTCTGACATTATTTG
GATTTTCAAAAGCTTTGATATTCAGGGTTTTAACAGGAGATTCAAGGATA
TTCATCGACGGTACGATTCGCAGCTGGAGAATATCATAACAAATCGTGAA
AAATTAAGGAAGGAGAAGAAGGAAAGTGAGGAGAAAGTGAAGGATTTGCT
TGATATTTTGCTCGATGTTCTGGAGAATCAGAATTCGGAGATCAAGTTAA
CTAGAGATCACGTCAAAGCCCTATGTGTGGATTTCCTCACTGCTGGCACA
GATACTTCATCCACGTCATTGGAATGGTCATTGGCAGAGCTCATAAACCA
TCCAATGGTGCTTCAGGAAGCACAGCAAGAGCTTGATCAAGTTGTGGGAA
GAAACAGGCTTGTTCAAGAATCTGACGTTCCTCATCTCCCCTATATTCAA
GCCATCATTAAAGAATCATTTCGGATTCATCCACCAATTCCATTGATTAG
CAGGAAAGCAGTAGAAGACTGTAAAATTGGCAACTACGTAATTCCTAAAG
ACACTGTGTTGTTTGTGAACCTTTGGTCCATGGGTAGGGACCCCAA
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