CX070403

Overview
NameCX070403
Unique NameCX070403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 7.079e-91
Identity = 157/229 (68.56%), Postives = 182/229 (79.48%), Query Frame = 1
Query:   55 MAYSKNFTLLISIAISSLMVASA--SNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNG 735
            M  S + T +++  +   +  SA  SNF+ +FD+TWGD RGKI N G +LSLSLD+ SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G+T DEIDFEFLGN +G PY LHTNVF  GKGDREQQF+LWFDPT +FHTYS++W PQ I+F VD  PIR F N E  GV FPK+QPMRIYSSLWNADDWATRGGL+KTDW++APFTA YR FNA AC  S+G
Sbjct:    1 MGPSSSLTTIVATVLLVTLFGSAYASNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTASSG 229          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.208e-90
Identity = 155/213 (72.77%), Postives = 174/213 (81.69%), Query Frame = 1
Query:   79 LLISIAISS---LMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFN 708
            LL+S+ ++    ++ ASA NFY+ FDITWG+GR  I  NGQLL+ +LDK SGSGFQSK EYLFGKIDM+LKLV GNSAGTVTAYYL S G+ WDEIDFEFLGN +G PYT+HTNVFT GKGDRE QF LWFDPTADFHTY+V WNP  I+F VDG PIR FKN E NGV +PKNQPMRIYSSLW ADDWAT GG +K DW+ APF ASYRNFN
Sbjct:   10 LLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFN 222          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.690e-90
Identity = 153/219 (69.86%), Postives = 182/219 (83.11%), Query Frame = 1
Query:   64 SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            +K   LL+S+ +  L+  SA +FY +FDITWG+GR  I+ +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLV GNSAGTVTAYYL S G TWDEIDFEFLGN++G PY LHTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASY++FN   C
Sbjct:    6 TKQSLLLLSLLL--LISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDC 222          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 7.827e-90
Identity = 153/219 (69.86%), Postives = 179/219 (81.74%), Query Frame = 1
Query:   64 SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            +K   LL++  +  + VA+ S FY  FDITWG GR  I  +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLVPGNSAGTVTAYYL S G TWDEIDFEFLGN++G PY +HTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASYR+FN   C
Sbjct:    6 TKQSPLLLASLLILIGVATGS-FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDC 223          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 2.974e-89
Identity = 153/227 (67.40%), Postives = 184/227 (81.06%), Query Frame = 1
Query:   70 NFTLLISIAISSLM-VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            N T+L+++ + ++   A + +F ++FD+TWG+ RGKI + G++LSLSLD+ SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGN +G PY LHTNVF  GKG+REQQF+LWFDPT +FHTYS++W PQ I+F VD  PIR F N E  GV FPKNQPM+IYSSLWNADDWATRGGL+KTDW++APFTA YR FNA AC  S+G S C
Sbjct:    6 NRTVLMTLLVVTMAGTAFSGSFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFC 232          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.388e-70
Identity = 132/234 (56.41%), Postives = 160/234 (68.38%), Query Frame = 1
Query:   64 SKNFTLLISIAISSLMVASASN------FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            S  +T LI ++++S   A+         F +++  TW     K LN G  + L LDK +G+GFQSK  YLFG   M +KLVPG+SAGTVTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H YSVLWN  +IVFYVD  PIR FKN    GV FP NQPM+IY+SLWNADDWATRGGL KTDW++APF ASY+ F+ + C  S     C
Sbjct:    3 SSLWTCLILLSLASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFC 236          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.299e-68
Identity = 117/227 (51.54%), Postives = 163/227 (71.81%), Query Frame = 1
Query:   64 SKNFTLLISIAISSL-MVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKS 741
            +K    +++ A+++L      ++F ++F +TWG  +  +  NG  L L LDK++GS  +SK  +LFG ++M +KLVPGNSAGTV AYYL S GST DEIDFEFLGN +G PYT+HTN++  GKG+REQQF  WF+PT  FH Y++ WNP  +V++VDG+PIR F+N ES G+ +P  Q M++++SLWNA+DWAT+GG +KT+WT APF A  R + A AC+W    S
Sbjct:    6 AKTLMFVLAAALATLGRTFVEADFSKNFIVTWG--KDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVS 230          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.697e-68
Identity = 120/197 (60.91%), Postives = 149/197 (75.63%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            F+++++ +W     K L+ G  + L LD++SG+GFQSK  YLFG   M+LKLV G+SAG VTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H+YSVLWN  +IV +VD  PIR FKN +  GV FP NQPM+IYSSLW+ADDWATRGGL KTDW+ APFTASY +F+ + C
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGC 228          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.216e-68
Identity = 126/227 (55.51%), Postives = 156/227 (68.72%), Query Frame = 1
Query:   79 LLISIAISSLMVASASN----FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            +L+S+A S+L  A        F +++  TW     K  N G  + L LDK +G+GFQ+K  YLFG   M +K+VPG+SAGTVTA+ L S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT  +H YSVLWN  +IVF VD  PIR FKNL+  GV FP NQPM++Y+SLWNADDWATRGGL KTDW++APF A Y+ F+ + C  S     C
Sbjct:   11 VLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFC 237          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.421e-68
Identity = 120/206 (58.25%), Postives = 149/206 (72.33%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            F +++  TW     K  N G  + L LDK +G+GFQSK  YLFG   M +K+VPG+SAGTVTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDPT ++H YS+LWN  +IVF+VD  PIR FKN +  GV FP +QPM+IY+SLWNADDWATRGGL KTDW++APF A+Y+ F+ + C  S     C
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFC 238          
The following BLAST results are available for this feature:
BLAST of CX070403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH15_ARATH7.079e-9168.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH1.208e-9072.77Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH2.690e-9069.86Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH7.827e-9069.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH2.974e-8967.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.388e-7056.41Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH1.299e-6851.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.697e-6860.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN2.216e-6855.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN8.421e-6858.25Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_16E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16E12-J24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070403 ID=CX070403; Name=CX070403; organism=Citrus sinensis; type=EST; length=748bp
ACCAACCCTTATAAGCTGCTTTCTGAAAACTCTCTCTTTATTGATTGCAG
TACTATGGCTTACTCAAAAAATTTTACTCTGCTCATCTCTATAGCAATCA
GCTCTTTGATGGTTGCTTCTGCTAGTAATTTCTACCAAGACTTTGATATC
ACTTGGGGAGATGGCCGTGGTAAGATACTCAACAACGGCCAGCTTCTCTC
CCTCTCCCTTGACAAAGCCTCAGGCTCAGGCTTCCAGTCCAAGAGCGAGT
ACCTTTTTGGCAAAATCGACATGCAACTCAAGCTTGTCCCTGGCAATTCT
GCCGGCACAGTCACCGCCTACTACTTAAAATCACCAGGATCAACATGGGA
TGAGATAGACTTTGAATTCTTGGGGAATTTAAGTGGTGATCCTTATACTC
TTCATACTAATGTGTTCACAAATGGCAAAGGTGACAGAGAGCAACAATTC
CACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCCGTTCTCTG
GAACCCCCAACGTATTGTCTTCTATGTTGATGGCTCGCCAATTAGAGAGT
TCAAGAACTTGGAATCAAACGGCGTACTCTTTCCCAAAAACCAGCCGATG
AGGATTTACTCGAGTCTCTGGAACGCCGATGACTGGGCCACGAGAGGTGG
CCTTATCAAAACTGACTGGACCCAAGCTCCCTTCACTGCTTCTTACAGAA
ACTTCAATGCCAATGCTTGCGTCTGGTCTAATGGAAAATCCTCTTGCA
back to top