CX070403

Overview
NameCX070403
Unique NameCX070403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.421e-68
Identity = 123/206 (59.71%), Postives = 148/206 (71.84%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            F +++  TW     K LN G  + L LDK +G+GFQSK  YLFG   M +K+V G+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT G G+REQ+ +LWFDP+ D+H+YSVLWN  +IVF+VD  PIR FKN +  GV FP NQPM+IYSSLWNADDWATRGGL KT+W +APF ASYR F+ + C  S     C
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFC 237          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.876e-67
Identity = 119/206 (57.77%), Postives = 149/206 (72.33%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            F +++  TW       +N G+ + LSLDK +G+GFQ++  YLFG   M +KLV G+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVF+ GKGDREQ+ +LWFDPT D+H+YSVLWN   I F+VD +PIR FKN +  GV +P +QPM++YSSLWNADDWATRGG  KTDW++APF ASYR F+ + C  S     C
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFC 237          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.128e-67
Identity = 117/197 (59.39%), Postives = 146/197 (74.11%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            F+++++ +W     K LN G    L LD++SG+GFQSK  YLFG   M+++LV G+SAG VTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKG+REQ+ +LWFDPT  +H+YSVLWN   IV +VD  PIR FKN +  GV FP NQPM+IYSSLW+ADDWATRGGL KT+W  APFTASY +F+ + C
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGC 229          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.709e-66
Identity = 113/228 (49.56%), Postives = 164/228 (71.93%), Query Frame = 1
Query:   61 YSKNFTLLISIAISSLMV-------ASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTW-DEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            YS +F   + + I +L+        A  + F +DF   W +   + + +G+ + L LD+++G GF SK +YLFG++ M++KL+PG+SAGTVTA+Y+ S  +T  DE+DFEFLGN SG PY++ TN+F +GKGDREQ+ +LWFDP+ D+HTY++LW+ + IVFYVD  PIRE+KN E+  + +P +QPM +YS+LW ADDWATRGGL K DW++APF A Y++F+   C
Sbjct:    5 YSPSFPGTLCLCIFTLLTLMFIRVSARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGC 232          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.293e-65
Identity = 118/197 (59.90%), Postives = 142/197 (72.08%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            F +++  TW     K LN G  L L LDK +G+GFQSK  YLFG   M +KL  G++AG VTA+YL S  +  DEIDFEFLGN +G P  L TNVFT GKG+REQ+ +LWFDP+  +HTYSVLWN  +IVF+VD  PIR FKN +  GV FP NQPM++YSSLWNADDWATRGGL KT+W  APF ASYR F+ + C
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGC 230          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.995e-65
Identity = 110/214 (51.40%), Postives = 156/214 (72.90%), Query Frame = 1
Query:   79 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            +++ + +S     S + F + +  +W       +N G++  L LD  SG+GF+S+S+YLFGK+ +Q+KLV G+SAGTVTA+Y+ S G   +E DFEFLGN +G+PY + TN++ NG G+REQ+ +LWFDPT +FHTYS+LW+ + +VF VD +PIR  KNLE  G+ F K+Q M +YSS+WNADDWAT+GGL+KTDW+ APF ASY+ F  +AC
Sbjct:   12 MIMVLVVSCGEAVSGAKFDELYRSSWA--MDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDAC 223          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 6.672e-65
Identity = 113/216 (52.31%), Postives = 155/216 (71.76%), Query Frame = 1
Query:   76 TLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSP-GSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            +L +  A+   +++  + F  DF I W D     ++ G+ + L LD +SG GF SK +YLFG++ M++KL+PG+SAGTVTA+Y+ S   S  DE+DFEFLGN SG PYT+ TNVF +GKGDREQ+ +LWFDP+ DFH Y++ WN  RIVFYVD  PIR +KN E+  V +P+ QPM +YS+LW ADDWATRGG+ K +W++APF A Y++F+   C
Sbjct:   16 SLCLFAALYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGC 231          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.138e-64
Identity = 115/197 (58.38%), Postives = 141/197 (71.57%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            F +++  TW     K  N G  L L LDK +G+GFQSK  YLFG   M +KL  G++AG VTA+YL S  +  DEIDFEFLGN +G P  L TNVFT GKG+REQ+ +LWFDP+  +HTYS+LWN  +IVF+VD  PIR FKN +  GV FP NQPM++YSSLWNADDWATRGGL KT+W  APF ASY+ F+ + C
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGC 231          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.817e-62
Identity = 114/236 (48.31%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   64 SKNFTLLISIAI-SSLM-------VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            SK F LL+  +I SSL+       V S+ +F +DF +TW        N+G+  +L LD+ SG+ F S   +LFG+IDM++KL+ G+S GTV AYY+ S     DEIDFEFLGN++G PY L TNV+  G  +RE++ HLWFDP  DFHTYS+LWN  +IVF VD  PIR ++N    GV +P+ QPM + +SLWN + WATRGG  K DW++ PF AS+ ++  +AC+W    S C
Sbjct:    7 SKPFVLLVGFSIISSLLLWVSQASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFC 242          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.099e-62
Identity = 113/232 (48.71%), Postives = 164/232 (70.69%), Query Frame = 1
Query:   55 MAYSKNFTLLISIAISSLMVASAS--NFYQDFDITWGDGRGKILNNG---QLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSN 732
            MA     ++  ++A+S L  +SA+   FY+ FD+       +++++    Q ++L+LD++SGSGF SK  YLFG+  +Q+KLV GNSAGTVT++YL S  G   DEID EF+GNLSG+PY ++TNV+ NG G +E QF+LWFDPTADFHTY ++WNPQ I+F VD  P+R FK  +   + +P+++PMR++++LW+   WATR G +K DW+ APF  SYR ++ NACV +N
Sbjct:    1 MAKHLALSVAAAVAVSWLAASSAAAAGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDD--LAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNN 230          
The following BLAST results are available for this feature:
BLAST of CX070403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH5_ARATH8.421e-6859.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.876e-6757.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC7.128e-6759.39Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH2.709e-6649.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB2.293e-6559.90Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH9_ARATH2.995e-6551.40Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH7_ARATH6.672e-6552.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH1.138e-6458.38Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH1.817e-6248.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ3.099e-6248.71Xyloglucan endotransglycosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16E12-J24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070403 ID=CX070403; Name=CX070403; organism=Citrus sinensis; type=EST; length=748bp
ACCAACCCTTATAAGCTGCTTTCTGAAAACTCTCTCTTTATTGATTGCAG
TACTATGGCTTACTCAAAAAATTTTACTCTGCTCATCTCTATAGCAATCA
GCTCTTTGATGGTTGCTTCTGCTAGTAATTTCTACCAAGACTTTGATATC
ACTTGGGGAGATGGCCGTGGTAAGATACTCAACAACGGCCAGCTTCTCTC
CCTCTCCCTTGACAAAGCCTCAGGCTCAGGCTTCCAGTCCAAGAGCGAGT
ACCTTTTTGGCAAAATCGACATGCAACTCAAGCTTGTCCCTGGCAATTCT
GCCGGCACAGTCACCGCCTACTACTTAAAATCACCAGGATCAACATGGGA
TGAGATAGACTTTGAATTCTTGGGGAATTTAAGTGGTGATCCTTATACTC
TTCATACTAATGTGTTCACAAATGGCAAAGGTGACAGAGAGCAACAATTC
CACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCCGTTCTCTG
GAACCCCCAACGTATTGTCTTCTATGTTGATGGCTCGCCAATTAGAGAGT
TCAAGAACTTGGAATCAAACGGCGTACTCTTTCCCAAAAACCAGCCGATG
AGGATTTACTCGAGTCTCTGGAACGCCGATGACTGGGCCACGAGAGGTGG
CCTTATCAAAACTGACTGGACCCAAGCTCCCTTCACTGCTTCTTACAGAA
ACTTCAATGCCAATGCTTGCGTCTGGTCTAATGGAAAATCCTCTTGCA
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