CX070403

Overview
NameCX070403
Unique NameCX070403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.904e-62
Identity = 112/224 (50.00%), Postives = 150/224 (66.96%), Query Frame = 1
Query:   91 IAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSP---GSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLES--NGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            +A SS+      +F  +F+I W +      ++G++ +LSLD  +G GFQ+K  Y FG   M+LKLV G+SAG VTAYY+ S    G   DEIDFEFLGN +G PY + TNV+ NG G+RE +  LWFDPT D+HTYS+LWN  ++VF+VD  PIR +KN +   N   FP  +PM ++SS+WNADDWATRGGL KTDW +APF +SY++F    C W +   +C
Sbjct:   12 MASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPAC 235          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.145e-59
Identity = 109/208 (52.40%), Postives = 146/208 (70.19%), Query Frame = 1
Query:  121 ASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSS 744
            A +F  ++ +TWG      LN G+ + LS+D +SGSGF+SKS Y  G   M++KL P +SAG VTA+YL S G T DE+DFEFLGN  G P  + TNVF+NG+G REQ+F  WFDPT  FHTY +LWNP +IVFYVD  PIR FKN++ +GV +P ++PM++ +SLWN ++WAT GG  K +W  APF A Y+ F+ + C   NG+S+
Sbjct:   29 AIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGC-HVNGQSN 234          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.688e-57
Identity = 103/210 (49.05%), Postives = 146/210 (69.52%), Query Frame = 1
Query:  118 SASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            S   F  ++ +TWG      LN G+ + LSLD +SGSGF+SK+ Y  G   +++K+ P +++G VTA+YL S G+T DE+DFEFLGN  G    + TNVFTNGKG+REQ+  LWFDP+ DFHTY++LWNP +IV YVD  P+R FKN  S G+ +P ++PM++  SLWN ++WAT GG  K +W+ APF A+++ FN + C  +  K++C
Sbjct:   35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNAC 242          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.335e-56
Identity = 100/197 (50.76%), Postives = 140/197 (71.07%), Query Frame = 1
Query:  130 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            F Q++ +TWG      L++G+ + L +D++SG GF+SK  Y  G  +M++K+  GN+ G VTA+YL S G   DEIDFEFLGN +G P TL TN+F NG+G+RE++F LWF+PT  +HTY +LWNP +IVFYVD  PIR +KN   NGV +P ++PM++ +SLWN DDWAT GG  K +W+ +PF A +R+F  + C
Sbjct:   35 FGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN--ENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGC 228          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.669e-45
Identity = 97/217 (44.70%), Postives = 127/217 (58.53%), Query Frame = 1
Query:  124 SNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKS----PGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDR-----EQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            S F ++F   WG    +      +++L LDK++GSGF+S   Y  G     +KL PG +AG  T+ YL +    PG   DE+D EFLG   G PY+L TNVF  G GDR     E +F LWFDPT DFH Y++LWNP +IVF+VD  PIR +     N  +FP  +PM +Y S+W+A DWAT  G IK D+   PF A Y+NF    C  ++  SSC
Sbjct:   37 SPFDREFRTLWGSQHQR--REQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDH-DEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYN--RKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCT-ADSSSSC 246          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.375e-43
Identity = 92/207 (44.44%), Postives = 121/207 (58.45%), Query Frame = 1
Query:  127 NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKS----PGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD-----REQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            NFY+ F   WG    ++  N   L++ LD+ SGSGF+S   +  G     +KL PG +AG +T+ YL +    PG   DE+D EFLG   G PYTL TNV+  G GD     RE +F LWFDPT DFH Y++LW+P+ I+F VD  PIR +   + +   FP  +PM +Y S+W+A  WAT  G  K D+   PFTA Y NF A  C
Sbjct:   42 NFYKGFRNLWGPQHQRMDQNA--LTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFH-DEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYP--KKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGC 242          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38
Identity = 87/228 (38.16%), Postives = 129/228 (56.58%), Query Frame = 1
Query:   55 MAYSKNFTLLIS-IAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD--REQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            + +   FT L+S  A+  L +     F + +   +GD    +  +G+ + L+LD+ +GSGF S   YL G     +KL    SAG V A+YL +        DEIDFEFLGN+ G  + + TN++ NG     RE++++LWFDPT DFH YS+LW+   I+FYVD  PIRE K   S G  FP  +PM +YS++W+   WAT GG    ++  AP+ + + +   + C
Sbjct:    8 LVFMSLFTSLVSGFALQKLPLIQ---FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGC 231          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.076e-38
Identity = 83/232 (35.78%), Postives = 131/232 (56.47%), Query Frame = 1
Query:   49 STMAYSKNFTLLISIAISSLMVASASN---FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDR--EQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            S  +Y+  F L++ + + S    +  N   F +     +GD       +   + L LD+ +GSGF S + Y  G     +KL    +AG V A+Y  +      T DE+D EFLGN+ G P+   TN++ NG   R  E+++ LWFDP+ +FH YS+LW P +I+F+VD  PIRE    ++ G  +P  +PM +Y+++W+A DWAT GG  K ++  APF A +++F+ + C
Sbjct:    2 SKSSYNHIFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGC 232          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.549e-37
Identity = 78/199 (39.20%), Postives = 119/199 (59.80%), Query Frame = 1
Query:  163 GRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGS---TWDEIDFEFLGNLSGDPYTLHTNVFTNG--KGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSS 744
            G   I  NG L  L+LDK+SG+G  SK++Y +G    +LKL  G ++G V A+YL +  +   + DEID E LG    D +T+ TNV+ NG  +  RE++F+ WFDPT  FH Y+++WN    VF VD  P+R+F N  +    +P ++PM +Y ++W+  +WAT+GG    ++  APF  S  +   + C  +NG S+
Sbjct:   52 GAHNIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSST 249          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.642e-37
Identity = 80/219 (36.53%), Postives = 125/219 (57.08%), Query Frame = 1
Query:   79 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGK--GDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANAC 720
            L+   A+ +L + S   F + +   +GD    +  +G+ + L+LD+ +GSGF S   YL G     +KL    +AG V A+Y+ +        DEIDFEFLGN+    + + TN++ NG     RE++++LWFDPT DFH YS+LW+   I+F+VD  PIRE K     G  FP ++PM +Y+++W+   WAT GG    ++  AP+ A + +   + C
Sbjct:   17 LVSGFALQNLPITS---FEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGC 231          
The following BLAST results are available for this feature:
BLAST of CX070403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH8_ARATH6.904e-6250.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH7.145e-5952.40Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH6.688e-5749.05Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH4.335e-5650.76Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH31_ARATH7.669e-4544.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH9.375e-4344.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH3.121e-3838.16Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH4.076e-3835.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH1.549e-3739.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH2.642e-3736.53Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16E12-J24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070403 ID=CX070403; Name=CX070403; organism=Citrus sinensis; type=EST; length=748bp
ACCAACCCTTATAAGCTGCTTTCTGAAAACTCTCTCTTTATTGATTGCAG
TACTATGGCTTACTCAAAAAATTTTACTCTGCTCATCTCTATAGCAATCA
GCTCTTTGATGGTTGCTTCTGCTAGTAATTTCTACCAAGACTTTGATATC
ACTTGGGGAGATGGCCGTGGTAAGATACTCAACAACGGCCAGCTTCTCTC
CCTCTCCCTTGACAAAGCCTCAGGCTCAGGCTTCCAGTCCAAGAGCGAGT
ACCTTTTTGGCAAAATCGACATGCAACTCAAGCTTGTCCCTGGCAATTCT
GCCGGCACAGTCACCGCCTACTACTTAAAATCACCAGGATCAACATGGGA
TGAGATAGACTTTGAATTCTTGGGGAATTTAAGTGGTGATCCTTATACTC
TTCATACTAATGTGTTCACAAATGGCAAAGGTGACAGAGAGCAACAATTC
CACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCCGTTCTCTG
GAACCCCCAACGTATTGTCTTCTATGTTGATGGCTCGCCAATTAGAGAGT
TCAAGAACTTGGAATCAAACGGCGTACTCTTTCCCAAAAACCAGCCGATG
AGGATTTACTCGAGTCTCTGGAACGCCGATGACTGGGCCACGAGAGGTGG
CCTTATCAAAACTGACTGGACCCAAGCTCCCTTCACTGCTTCTTACAGAA
ACTTCAATGCCAATGCTTGCGTCTGGTCTAATGGAAAATCCTCTTGCA
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