CX070361

Overview
NameCX070361
Unique NameCX070361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_SISMO (30S ribosomal protein S7, chloroplastic OS=Sisyrinchium montanum GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_SCHCH (30S ribosomal protein S7, chloroplastic OS=Schisandra chinensis GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTEANPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_PLAOC (30S ribosomal protein S7, chloroplastic OS=Platanus occidentalis GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_PHOTN (30S ribosomal protein S7, chloroplastic OS=Phormium tenax GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_MUSCM (30S ribosomal protein S7, chloroplastic OS=Muscari comosum GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_MAIRA (30S ribosomal protein S7, chloroplastic OS=Maianthemum racemosum GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_LIRTU (30S ribosomal protein S7, chloroplastic OS=Liriodendron tulipifera GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_ILLPA (30S ribosomal protein S7, chloroplastic OS=Illicium parviflorum GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_ILLOL (30S ribosomal protein S7, chloroplastic OS=Illicium oligandrum GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_DRIWI (30S ribosomal protein S7, chloroplastic OS=Drimys winteri GN=rps7 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.506e-79
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
The following BLAST results are available for this feature:
BLAST of CX070361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RR7_SISMO2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Sisyrin... [more]
RR7_SCHCH2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Schisan... [more]
RR7_PLAOC2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Platanu... [more]
RR7_PHOTN2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Phormiu... [more]
RR7_MUSCM2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Muscari... [more]
RR7_MAIRA2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Maianth... [more]
RR7_LIRTU2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Liriode... [more]
RR7_ILLPA2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Illiciu... [more]
RR7_ILLOL2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Illiciu... [more]
RR7_DRIWI2.506e-7996.7730S ribosomal protein S7, chloroplastic OS=Drimys ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16D02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16D02-H4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070361 ID=CX070361; Name=CX070361; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTCGAGAAATATATCGATCAATTCCGACTCTTTCT
TTTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCACGGATCTATG
TGTCTATATAGACCCTGTTATGGATTAACGAAAATGTGCAAAAGCTCTAT
TTGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCA
CTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATT
TCGACCCGGACGTTTTCGGGATGCCCCTAATAACCAACGAACGGCAAGTG
CTTTTCCTTGTGCGGATCCTATTTCAATGGGAACTTGATGAGTCGATCCG
CCTACACGTCTTGCTTTTACTGCTATATCGGGAGTTACTCCACGTATTGC
TTGACGTAAAACAGATAGTGGATTTTTTTCTGTCTTTTGTTGAATCTTTT
TCAAGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTCCGTGTTTC
AGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATC
GGATTTTGCAGTTTTTTCTTCTGTAGTACCTCGACGTGACATGAGCGCGA
AAGGGGTTCAAGAATCCGTTTTCTTTTTATAAGGGCTAAAATCATTTATT
TTGGCTTTTTGACCCCATATTTAGAACGCCCTTGTTGACGATCCTTTACT
CCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAA
ATCCTTAACCCTCCCCCCTCTTACTAAGACTACAGAATGTTCTTGTAAAT
TATGGCCAATACCAGGTATATAAGC
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