DR404327

Overview
NameDR404327
Unique NameDR404327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 43/134 (32.09%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  297 IRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHM-DHENIIAIKDIIRPPQRETFNDVYIVYELMD-TDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            +R VGRG Y  V   +N    E+  IK +       +  K+  REIK+L+++    NI+ + D++R    +T +   +++E ++ TDF  +   +  LTD   RY++Y+LL+ L + HS  ++HRD+KP N+++
Sbjct:   37 VRKVGRGKYSEVFEGINMNNNEKCIIKIL-----KPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPS---LIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMI 159          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CDK10_HUMAN (Cell division protein kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 46/146 (31.51%), Postives = 81/146 (55.48%), Query Frame = 3
Query:  276 SRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKR------TLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQD-LTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            S K    +  +G G YGIV  A +++T E VA+KK+      R+D ++      +LREI LL  + H NI+ +K+++     E+   +++V    + D   ++ +     ++   +  + Q+LRGL+Y+H   ++HRDLK SNLL+
Sbjct:   35 SVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKV------RMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLES---IFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLM 171          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: STK33_HUMAN (Serine/threonine-protein kinase 33 OS=Homo sapiens GN=STK33 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 38/132 (28.79%), Postives = 74/132 (56.06%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELM-DTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            R +G+G++GIV  A + ET  + AIKK+          K   RE+ +L+ + HE+II ++ +   P++     +Y+V EL  D +  +I+      +++  R+ +  L   + Y+H+ +++HRDLK  N+++
Sbjct:  120 RILGKGSFGIVIEATDKETETKWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQVFETPKK-----MYLVMELCEDGELKEILDRKGHFSENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMV 246          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 57/191 (29.84%), Postives = 90/191 (47.12%), Query Frame = 3
Query:  135 SDTVFGANRIMSGESSSGSGAHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDD----HCRYFLYQLLRGLKYVHSA-NVLHRDLKPSNLLL 692
            SD     +R M      G+G  T    V T GGR  Q        + +  Y+   R VG G++G+V  A   ET E VAIKK+        D +   RE++ +R +DH N++++K        +    + +V E +    H++I+ +  L       + + + YQ+ R L Y+H    V HRD+KP NLL+
Sbjct:   32 SDMKIRDDREMEATVVDGNGTETGHIIVTTIGGRNGQP-------KQTISYMAE-RVVGHGSFGVVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLV 208          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CDC2_PETHY (Cell division control protein 2 homolog (Fragment) OS=Petunia hybrida GN=CDC2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 3
Query:  423 LREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDH--CRYFLYQLLRGLKYVHSANVLHRDLKP 677
            +REI LL+ M H NI+ ++D++   +R     +Y+V+E +D D  + + S  + + D    + FLYQ+LRG+ Y HS  VLHRDLKP
Sbjct:    8 IREISLLKEMQHANIVRLQDVVHSEKR-----LYLVFEYLDLDLKKHMDSSPEFSKDPRLVKMFLYQILRGIAYCHSHRVLHRDLKP 89          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: Y823_ENCCU (Probable cell division protein kinase ECU08_0230 OS=Encephalitozoon cuniculi GN=ECU08_0230 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKR-----TLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            +G G YG V  A+++ET+E+VA+K+I      R++ K       LREI +L+ + H NII++  II      T     +V+  +D +  + I  +   T  +    + QL+ G+ Y+H  NV+HRDLKP N+L+
Sbjct:   10 IGSGTYGEVYEAIDTETKEKVALKRI------RLNEKEGMPGTALREISILKKLSHRNIISLVSIIHTDALLT-----MVFPFIDYELKKYIGMN---TGKNIMELVNQLICGVHYLHRMNVVHRDLKPQNILV 129          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MYLKG_DICDI (Probable myosin light chain kinase DDB_G0275057 OS=Dictyostelium discoideum GN=DDB_G0275057 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 41/132 (31.06%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTD--FHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            + +GRGA+ +V       T ++VA+K I   F  +   ++  REI +++ + HEN++++K+I      E+ + + +V EL+     F++I+      T+   R  + Q+  G++Y+HS  + HRDLKP NLL
Sbjct:   60 KELGRGAFSVVREGTRKTTSDKVALKYIEKKFVKKKHIEQLRREIDIMKKVKHENVLSLKEIF-----ESDSHLTLVMELVTGGELFYKIV-ERGSFTEKGARNVVRQVCAGVEYLHSQGIAHRDLKPENLL 185          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 43/136 (31.62%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDD----HCRYFLYQLLRGLKYVHS-ANVLHRDLKPSNLLL 692
            R VG+G++G+V  A   ET E VAIKK+        D +   RE++ +R +DH N++ +K        +    + +V E +    H++IR +  +       + + + YQ+ R L Y+H+   V HRD+KP NLL+
Sbjct:   78 RAVGQGSFGVVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIYVKLYSYQICRSLAYIHNCVGVSHRDIKPQNLLV 207          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 50/171 (29.24%), Postives = 84/171 (49.12%), Query Frame = 3
Query:  201 TIVKGVPTHGGRYVQYNVYGNLFEVSR--KYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDD----HCRYFLYQLLRGLKYVHSA-NVLHRDLKPSNLLL 692
            T+V G  T  G  +   + G   +  +   Y+   R VG G++G+V  A   ET E VAIKK+        D +   RE++ +R +DH N++++K        +    + +V E +    H++I+ +  L       + + + YQ+ R L Y+H    V HRD+KP NLL+
Sbjct:   39 TVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAE-RVVGHGSFGVVFQAKCLETGETVAIKKVLQ------DRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLV 202          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = 3
Query:  276 SRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKR------TLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQD-LTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            S K    +  +G G YGIV  A ++ T E VA+KK+      R+D ++      +LREI LL  + H NI+ +K+++     E+   +++V    + D   ++ +     ++   +  + Q+LRGL+Y+H   ++HRDLK SNLL+
Sbjct:   33 SVKEFEKLNRIGEGTYGIVYRARDTHTDEIVALKKV------RMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLES---IFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLM 169          
The following BLAST results are available for this feature:
BLAST of DR404327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK22_ARATH1.501e-1232.09Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CDK10_HUMAN1.501e-1231.51Cell division protein kinase 10 OS=Homo sapiens GN... [more]
STK33_HUMAN1.960e-1228.79Serine/threonine-protein kinase 33 OS=Homo sapiens... [more]
MSK1_MEDSA1.960e-1229.84Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
CDC2_PETHY1.960e-1241.38Cell division control protein 2 homolog (Fragment)... [more]
Y823_ENCCU2.560e-1234.33Probable cell division protein kinase ECU08_0230 O... [more]
MYLKG_DICDI2.560e-1231.06Probable myosin light chain kinase DDB_G0275057 OS... [more]
MSK2_MEDSA2.560e-1231.62Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG1_ARATH2.560e-1229.24Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
CDK10_BOVIN2.560e-1231.51Cell division protein kinase 10 OS=Bos taurus GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P18 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404327 ID=DR404327; Name=DR404327; organism=Citrus sinensis; type=EST; length=692bp
GGGGACTCAAAAGAAAATATGTCAAAGCCCTTTCCACCTACCGACACGCC
CTCCTAAAATCTAGTAGCTCTTTCCTCGAAATTGGTTCTCCTTCTCGTTC
CAATTTTCAGGAAAAATCCTTGTCGGGTTCGGATTCGGATACCGTATTCG
GGGCCAACAGAATCATGTCAGGAGAGTCGAGCTCCGGTTCGGGTGCTCAT
ACTATTGTCAAAGGAGTTCCGACTCATGGGGGACGTTACGTGCAGTATAA
TGTGTACGGTAACCTTTTCGAAGTTTCTAGAAAGTATGTCCCTCCTATAC
GCCCCGTTGGCAGAGGCGCTTATGGTATTGTGTGTGCTGCTATGAATTCG
GAGACTCGGGAAGAGGTTGCCATTAAGAAAATTGGCAATGCATTTGATAA
TAGAATTGATGCCAAGAGGACTTTGCGAGAAATTAAGCTGCTTCGTCACA
TGGATCATGAAAATATTATTGCCATCAAAGACATCATACGACCACCACAG
AGGGAGACCTTCAATGATGTATACATAGTTTATGAATTGATGGACACTGA
TTTCCATCAAATCATCCGTTCCCATCAAGATCTGACAGATGATCATTGTC
GGTACTTCTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCA
AACGTTTTGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTT
back to top