DR404327

Overview
NameDR404327
Unique NameDR404327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6200 contig Csv1_Contig6200:1..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 55/208 (26.44%), Postives = 98/208 (47.12%), Query Frame = 3
Query:   84 GSPSRSNFQEKSLSGSDSDTVFGANRIMSGESSSGSGAHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPP-QRETFNDVYIVYELMDTDFHQIIRSH----QDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            G P  ++F E S       + FG+ ++       GS   T+V   P  G    Q   Y +            + +G G++G+V  A   ++ E VAIKK+        D +   RE++++R +DH NI+ ++       +++    + +V + +    +++ R +    Q L   + + ++YQL R L Y+HS  + HRD+KP NLLL
Sbjct:    3 GRPRTTSFAE-SCKPVQQPSAFGSMKV--SRDKDGSKVTTVV-ATPGQGPDRPQEVSYTDT-----------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTL----REIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYE-LMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            R +G+G +  V  A N ET + VAIK +  A   ++   R +    REI  ++ + H N++ + +++    R     ++IV E +M  + H II +   L +D  R +  QL+  + Y HS  V HRDLK  NLLL
Sbjct:   23 RAIGQGTFAKVRFAKNMETGDHVAIKILDKA---KVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTR-----IFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKLENLLL 150          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CHK2_MOUSE (Serine/threonine-protein kinase Chk2 OS=Mus musculus GN=Chek2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGN-----AFDNRIDAKRTLR-EIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTD--FHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            + +G GA G V  A   +T ++VAIK I             D   ++  EI++L+ ++H  II IKD+          D YIV ELM+    F +++  ++ L +  C+ + YQ+L  ++Y+H   ++HRDLKP N+LL
Sbjct:  228 KTLGSGACGEVKMAFERKTCQKVAIKIISKRRFALGSSREADTAPSVETEIEILKKLNHPCIIKIKDVFDA------EDYYIVLELMEGGELFDRVV-GNKRLKEATCKLYFYQMLVAVQYLHENGIIHRDLKPENVLL 359          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CHK2_CAEEL (Serine/threonine-protein kinase chk-2 OS=Caenorhabditis elegans GN=chk-2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 44/148 (29.73%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  270 EVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNR----IDAKRTLR-EIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQD---LTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            E+++KY      +G+G +G V        R  VAIK++   F  R    I   R +R E+++++ + H NI+AI D I   +   ++ + I Y      F +++ S  +   L +   +YF +QL+  + Y+HS  + HRD+KP N+L
Sbjct:  164 ELTKKYHVTSHSLGKGGFGKVLLGYKKSDRSVVAIKQLNTQFSTRCSRAIAKTRDIRNEVEVMKKLSHPNIVAIYDWITVAK---YSYMVIEYVGGGEFFSKVVDSKYNRMGLGESLGKYFAFQLIDAILYLHSVGICHRDIKPENIL 308          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  297 IRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHEN----IIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQD-----LTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            +  +G G YG+V  A +  +   VA+KKI    ++       +REI LL+ ++ EN     + + DI+    +     +Y+V+E +D D  + +    +     L     + F YQL+ G+ + HS  ++HRDLKP NLL+
Sbjct:    7 VEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRSNCVRLLDILHAESK-----LYLVFEFLDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLI 142          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: ULK3_HUMAN (Serine/threonine-protein kinase ULK3 OS=Homo sapiens GN=ULK3 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 3
Query:  306 VGRGAYGIVCAAM-NSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELM-DTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            +G G Y  V  A    +TRE VAIK +     N+   +  L EI++L+ + H +I+ +KD      +   +++Y++ E     D  + I + + L +   R F+ QL   L+++H  N+ H DLKP N+LL
Sbjct:   20 LGSGTYATVYKAYAKKDTREVVAIKCVAKKSLNKASVENLLTEIEILKGIRHPHIVQLKDF-----QWDSDNIYLIMEFCAGGDLSRFIHTRRILPEKVARVFMQQLASALQFLHERNISHLDLKPQNILL 145          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: SNRK_RAT (SNF-related serine/threonine-protein kinase OS=Rattus norvegicus GN=Snrk PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 36/132 (27.27%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTD--FHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            + +GRG + +V  A +  T E+VA+K I     + +      +E++ ++ + H NI+ + ++I     +T   +Y++ EL D    F  I++  + L +D  + +  Q++  + Y H  +V+HRDLKP N++
Sbjct:   20 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVV 146          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: SNRK_MOUSE (SNF-related serine/threonine-protein kinase OS=Mus musculus GN=Snrk PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 36/132 (27.27%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTD--FHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            + +GRG + +V  A +  T E+VA+K I     + +      +E++ ++ + H NI+ + ++I     +T   +Y++ EL D    F  I++  + L +D  + +  Q++  + Y H  +V+HRDLKP N++
Sbjct:   20 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVV 146          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: SNRK_HUMAN (SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 36/132 (27.27%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  300 RPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTD--FHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            + +GRG + +V  A +  T E+VA+K I     + +      +E++ ++ + H NI+ + ++I     +T   +Y++ EL D    F  I++  + L +D  + +  Q++  + Y H  +V+HRDLKP N++
Sbjct:   20 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVV 146          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 38/130 (29.23%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYE-LMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            +G+G + +V    +  T+ EVAIK I  +  + ++ ++  RE+++++ +DH +II +  ++     ET + +Y+V E   + +    + +H  L +   R   +Q+L  + Y H   V+HRDLK  NLLL
Sbjct:   26 LGKGNFAVVKLGRHRTTKTEVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVM-----ETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKVVHRDLKAENLLL 150          
The following BLAST results are available for this feature:
BLAST of DR404327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSK3B_SPECI2.830e-1126.44Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
CIPK3_ORYSJ2.830e-1133.09CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CHK2_MOUSE2.830e-1133.09Serine/threonine-protein kinase Chk2 OS=Mus muscul... [more]
CHK2_CAEEL2.830e-1129.73Serine/threonine-protein kinase chk-2 OS=Caenorhab... [more]
CDC2_SCHPO2.830e-1129.79Cell division control protein 2 OS=Schizosaccharom... [more]
ULK3_HUMAN3.697e-1131.30Serine/threonine-protein kinase ULK3 OS=Homo sapie... [more]
SNRK_RAT3.697e-1127.27SNF-related serine/threonine-protein kinase OS=Rat... [more]
SNRK_MOUSE3.697e-1127.27SNF-related serine/threonine-protein kinase OS=Mus... [more]
SNRK_HUMAN3.697e-1127.27SNF-related serine/threonine-protein kinase OS=Hom... [more]
SIK2_MOUSE3.697e-1129.23Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P18 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404327 ID=DR404327; Name=DR404327; organism=Citrus sinensis; type=EST; length=692bp
GGGGACTCAAAAGAAAATATGTCAAAGCCCTTTCCACCTACCGACACGCC
CTCCTAAAATCTAGTAGCTCTTTCCTCGAAATTGGTTCTCCTTCTCGTTC
CAATTTTCAGGAAAAATCCTTGTCGGGTTCGGATTCGGATACCGTATTCG
GGGCCAACAGAATCATGTCAGGAGAGTCGAGCTCCGGTTCGGGTGCTCAT
ACTATTGTCAAAGGAGTTCCGACTCATGGGGGACGTTACGTGCAGTATAA
TGTGTACGGTAACCTTTTCGAAGTTTCTAGAAAGTATGTCCCTCCTATAC
GCCCCGTTGGCAGAGGCGCTTATGGTATTGTGTGTGCTGCTATGAATTCG
GAGACTCGGGAAGAGGTTGCCATTAAGAAAATTGGCAATGCATTTGATAA
TAGAATTGATGCCAAGAGGACTTTGCGAGAAATTAAGCTGCTTCGTCACA
TGGATCATGAAAATATTATTGCCATCAAAGACATCATACGACCACCACAG
AGGGAGACCTTCAATGATGTATACATAGTTTATGAATTGATGGACACTGA
TTTCCATCAAATCATCCGTTCCCATCAAGATCTGACAGATGATCATTGTC
GGTACTTCTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCA
AACGTTTTGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTT
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