DR404327

Overview
NameDR404327
Unique NameDR404327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.547e-38
Identity = 71/128 (55.47%), Postives = 101/128 (78.91%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            +G+G+YG+VC+A +  T E+VAIKKI N F++  DA R LREIKLLR + H +I+ IK I+ PP +  F D+Y+V+ELM++D HQ+I+++ DLT +H ++FLYQ+LR LKY+H+ANV HRDLKP N+L
Sbjct:   32 IGKGSYGLVCSANDIHTGEKVAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDFRDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQMLRALKYIHTANVYHRDLKPKNIL 159          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 71/128 (55.47%), Postives = 101/128 (78.91%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            VG+G+YG+V AA+++ T   VAIKKI + F++  DA R LREIKLLR + H +I+ IK I+ PP R  F D+YI++ELM++D HQ+I+++ DLT +H ++FLYQLLRG+KY+H+A+V HRDLKP N+L
Sbjct:   28 VGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNIL 155          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37
Identity = 81/142 (57.04%), Postives = 109/142 (76.76%), Query Frame = 3
Query:  267 FEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            F VS  Y   +  VG GAYGIVC+A++  ++++VAIKKI   F+  +   RTLRE+KLL+H +HENII+I  I RP   E+FN++Y++ ELM+TD H++IR+ Q+L+DDH +YF+YQ LR LK +HSANVLHRDLKPSNLLL
Sbjct:   62 FNVSDHY-QILEIVGEGAYGIVCSAIHKPSQQKVAIKKI-EPFERSMLCLRTLRELKLLKHFNHENIISILAIQRPINYESFNEIYLIQELMETDLHRVIRT-QNLSDDHIQYFIYQTLRALKAMHSANVLHRDLKPSNLLL 200          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37
Identity = 81/147 (55.10%), Postives = 114/147 (77.55%), Query Frame = 3
Query:  252 VYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            V+G LFEV+ +YV  +  +G GAYG+V +A+++ TR+ VAIKKI + F+++   +RTLREIK+L    HENII I++IIR    ++  D+YIV  LM+TD ++++++ Q L++DH  YFLYQ+LRGLKY+HSANVLHRDLKPSNLLL
Sbjct:   85 VHGQLFEVAPRYVN-LSYIGEGAYGMVASALDTITRDRVAIKKI-SPFEHQTFCQRTLREIKILNRFKHENIINIQEIIRSETVDSLKDIYIVQCLMETDLYKLLKT-QKLSNDHVCYFLYQILRGLKYIHSANVLHRDLKPSNLLL 228          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37
Identity = 72/128 (56.25%), Postives = 99/128 (77.34%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            VG+G+YG+V AA+++ T E VAIKKI + F++  DA R LREIK+LR + H +I+ IK I+ PP R  F D+Y+V+ELM++D HQ+I ++ DL+ +H R+FLYQLL  LKY+HSANV HRDLKP N+L
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNIL 146          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37
Identity = 72/128 (56.25%), Postives = 99/128 (77.34%), Query Frame = 3
Query:  306 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLL 689
            VG+G+YG+V AA+++ T E VAIKKI + F++  DA R LREIK+LR + H +I+ IK I+ PP R  F D+Y+V+ELM++D HQ+I ++ DL+ +H R+FLYQLL  LKY+HSANV HRDLKP N+L
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEANHDLSPEHHRFFLYQLLCALKYIHSANVFHRDLKPKNIL 146          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37
Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 3
Query:  252 VYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            V G  F+V  +Y+  +  +G GAYG+VC+A ++  +  VAIKKI + F+++   +RTLREIK+L    HENII I DIIR P  E   DVYIV +LM+TD ++++++ Q L++DH  YFLYQ+LRGLKY+HSANVLHRDLKPSNLLL
Sbjct:   17 VRGQAFDVGPRYIN-LAYIGEGAYGMVCSAHDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFKHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 160          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MK01_HUMAN (Mitogen-activated protein kinase 1 OS=Homo sapiens GN=MAPK1 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37
Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 3
Query:  252 VYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            V G +F+V  +Y   +  +G GAYG+VC+A ++  +  VAIKKI + F+++   +RTLREIK+L    HENII I DIIR P  E   DVYIV +LM+TD ++++++ Q L++DH  YFLYQ+LRGLKY+HSANVLHRDLKPSNLLL
Sbjct:   14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MK01_BOVIN (Mitogen-activated protein kinase 1 OS=Bos taurus GN=MAPK1 PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37
Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 3
Query:  252 VYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            V G +F+V  +Y   +  +G GAYG+VC+A ++  +  VAIKKI + F+++   +RTLREIK+L    HENII I DIIR P  E   DVYIV +LM+TD ++++++ Q L++DH  YFLYQ+LRGLKY+HSANVLHRDLKPSNLLL
Sbjct:   14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157          
BLAST of DR404327 vs. ExPASy Swiss-Prot
Match: MK01_RAT (Mitogen-activated protein kinase 1 OS=Rattus norvegicus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37
Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 3
Query:  252 VYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDFHQIIRSHQDLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLL 692
            V G +F+V  +Y   +  +G GAYG+VC+A ++  +  VAIKKI + F+++   +RTLREIK+L    HENII I DIIR P  E   DVYIV +LM+TD ++++++ Q L++DH  YFLYQ+LRGLKY+HSANVLHRDLKPSNLLL
Sbjct:   12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 155          
The following BLAST results are available for this feature:
BLAST of DR404327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK11_ORYSJ3.547e-3855.47Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]
MPK16_ORYSJ4.633e-3855.47Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
ERK1_CANAL1.032e-3757.04Extracellular signal-regulated kinase 1 OS=Candida... [more]
SUR1_CAEEL1.348e-3755.10Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]
MPK13_ORYSJ1.348e-3756.25Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MPK13_ORYSI1.348e-3756.25Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MK01_XENLA1.761e-3755.10Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
MK01_HUMAN2.299e-3755.10Mitogen-activated protein kinase 1 OS=Homo sapiens... [more]
MK01_BOVIN2.299e-3755.10Mitogen-activated protein kinase 1 OS=Bos taurus G... [more]
MK01_RAT3.003e-3755.10Mitogen-activated protein kinase 1 OS=Rattus norve... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P18 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404327 ID=DR404327; Name=DR404327; organism=Citrus sinensis; type=EST; length=692bp
GGGGACTCAAAAGAAAATATGTCAAAGCCCTTTCCACCTACCGACACGCC
CTCCTAAAATCTAGTAGCTCTTTCCTCGAAATTGGTTCTCCTTCTCGTTC
CAATTTTCAGGAAAAATCCTTGTCGGGTTCGGATTCGGATACCGTATTCG
GGGCCAACAGAATCATGTCAGGAGAGTCGAGCTCCGGTTCGGGTGCTCAT
ACTATTGTCAAAGGAGTTCCGACTCATGGGGGACGTTACGTGCAGTATAA
TGTGTACGGTAACCTTTTCGAAGTTTCTAGAAAGTATGTCCCTCCTATAC
GCCCCGTTGGCAGAGGCGCTTATGGTATTGTGTGTGCTGCTATGAATTCG
GAGACTCGGGAAGAGGTTGCCATTAAGAAAATTGGCAATGCATTTGATAA
TAGAATTGATGCCAAGAGGACTTTGCGAGAAATTAAGCTGCTTCGTCACA
TGGATCATGAAAATATTATTGCCATCAAAGACATCATACGACCACCACAG
AGGGAGACCTTCAATGATGTATACATAGTTTATGAATTGATGGACACTGA
TTTCCATCAAATCATCCGTTCCCATCAAGATCTGACAGATGATCATTGTC
GGTACTTCTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCA
AACGTTTTGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTT
back to top