CX070315

Overview
NameCX070315
Unique NameCX070315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070315 vs. ExPASy Swiss-Prot
Match: GL8D2_BOVIN (Glycosyltransferase 8 domain-containing protein 2 OS=Bos taurus GN=GLT8D2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16
Identity = 61/218 (27.98%), Postives = 98/218 (44.95%), Query Frame = 1
Query:    7 LSFQVYLFREKFVTGLIS-SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKRP-----------CYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIY--ELG---SLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPW 609
            ++F++  F    + G I   S R  L  PLN+ R YL  ++    ++VIYLD DVIV  DIQ+L+   L+ G      + C    ++           +    + ++            C FN GV+V ++  W+     +++EKWM+   E  +Y   LG   +  P L+VF G    I+  W+   L G N +            L+HW+G+ KPW
Sbjct:  106 INFKIVEFNPVVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQH-EKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSSQDIHRLVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHL-GWNPDTRYSEHFLQEAKLLHWNGRHKPW 321          
BLAST of CX070315 vs. ExPASy Swiss-Prot
Match: GL8D2_MOUSE (Glycosyltransferase 8 domain-containing protein 2 OS=Mus musculus GN=Glt8d2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 62/218 (28.44%), Postives = 97/218 (44.50%), Query Frame = 1
Query:    7 LSFQVYLFREKFVTGLIS-SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKR-----------PCYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIY--ELG---SLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPW 609
            ++F++  F    + G I   S R  L  PLN+ R YL  +L    ++VIYLD DVIV  DIQ+L+   L+ G      + C     +           +    + ++            C FN GV+V ++  W+     +++EKWM+   E  +Y   LG   +  P L+VF G    I+  W+   L G N +            L+HW+G+ KPW
Sbjct:  106 INFKIVEFNPTVLKGKIRPDSSRPELLQPLNFVRFYLP-LLVHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDIHRLVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHL-GWNPDARYSEHFLQEAKLLHWNGRHKPW 321          
BLAST of CX070315 vs. ExPASy Swiss-Prot
Match: GL8D2_MACFA (Glycosyltransferase 8 domain-containing protein 2 OS=Macaca fascicularis GN=GLT8D2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 60/218 (27.52%), Postives = 97/218 (44.50%), Query Frame = 1
Query:    7 LSFQVYLFREKFVTGLIS-SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWFDREFSRVFEGKRP-----------CYFNTGVMVMDLVRWREGDYMRKIEKWMRIQKERRIY--ELG---SLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPW 609
            ++F++  F    + G I   S R  L  PLN+ R YL  ++    ++VIYLD DVIV  DI +L+   L+ G      + C     +  +        +    + ++            C FN GV+V ++  W+     +++EKWM+   E  +Y   LG   +  P L+VF G    I+  W+   L G N +            L+HW+G+ KPW
Sbjct:  106 INFKIVEFNPMVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQH-EKVIYLDDDVIVQGDIHELYDTTLALGHAAAFSDDCDLPSAQDINRLVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKHQHITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHL-GWNPDARYSEHFLQEAKLLHWNGRHKPW 321          
The following BLAST results are available for this feature:
BLAST of CX070315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GL8D2_BOVIN5.812e-1627.98Glycosyltransferase 8 domain-containing protein 2 ... [more]
GL8D2_MOUSE7.591e-1628.44Glycosyltransferase 8 domain-containing protein 2 ... [more]
GL8D2_MACFA1.691e-1527.52Glycosyltransferase 8 domain-containing protein 2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16A11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16A11-B22-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070315 ID=CX070315; Name=CX070315; organism=Citrus sinensis; type=EST; length=754bp
CCTTATTTGAGCTTCCAAGTTTATCTGTTCCGAGAAAAATTCGTCACCGG
TTTGATCTCGTCTTCTATCCGCCGTGCTCTTGACAGCCCCTTGAATTATG
CGAGAATTTACTTAGCTGACATACTTGAGCCTTCTATCAAACGCGTAATC
TACCTCGACTCGGATGTCATTGTTGTCGATGATATACAGAAACTCTGGAG
GATTCCCCTATCTGGGGGAAGAACAATCGGAGCTCCAGAGTACTGTCATG
CGAATTTCACCAAGTATTTCTCCGATGAGTTCTGGTTCGACCGCGAGTTT
TCCAGGGTTTTCGAAGGGAAGAGACCTTGCTACTTCAATACAGGAGTGAT
GGTCATGGATTTGGTGAGATGGAGGGAGGGTGATTATATGAGGAAGATTG
AGAAATGGATGAGGATTCAAAAGGAGAGGAGGATTTATGAGCTGGGATCT
CTTCCGCCATTTTTGTTAGTGTTTGGGGGAGATGTGGAGGCCATTGATCA
CAGATGGAATCAGCACGGGCTTGGAGGACACAATGTGGAGAATAGTTGCA
GGAATTTGCATGCGGGTCCTGTGAGTTTGATGCATTGGAGTGGTAAAGGG
AAGCCATGGGTGAGGCTTGATGCCAAGAAGCCCTGCCCGGTTGATTATCT
CTGGGCGCCTTATGATCTTTACAACTCCCACACTCACTCTCAGTACTAGC
ATCAACAATGAAGCGAGTAAACAAACAAGCATACACTCTACAACAACAGC
CAAG
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