DR404319

Overview
NameDR404319
Unique NameDR404319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1492 contig Csv1_Contig1492:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H33_DROHY (Histone H3.3 OS=Drosophila hydei GN=His3.3A PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.244e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H33_DANRE (Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.244e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H33_CHICK (Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.244e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H33_BOVIN (Histone H3.3 OS=Bos taurus GN=H3F3A PE=1 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.244e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_STRDR (Histone H3, embryonic OS=Strongylocentrotus droebachiensis PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_SOLST (Histone H3, embryonic OS=Solaster stimpsoni PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_PYCHE (Histone H3, embryonic OS=Pycnopodia helianthoides PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_PSAMI (Histone H3, embryonic OS=Psammechinus miliaris PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_PISOC (Histone H3, embryonic OS=Pisaster ochraceus PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR404319 vs. ExPASy Swiss-Prot
Match: H3_PISBR (Histone H3, embryonic OS=Pisaster brevispinus PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.237e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   80 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 487
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of DR404319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_DROHY3.244e-5885.29Histone H3.3 OS=Drosophila hydei GN=His3.3A PE=3 S... [more]
H33_DANRE3.244e-5885.29Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3[more]
H33_CHICK3.244e-5885.29Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 SV=2[more]
H33_BOVIN3.244e-5885.29Histone H3.3 OS=Bos taurus GN=H3F3A PE=1 SV=3[more]
H3_STRDR4.237e-5885.29Histone H3, embryonic OS=Strongylocentrotus droeba... [more]
H3_SOLST4.237e-5885.29Histone H3, embryonic OS=Solaster stimpsoni PE=2 S... [more]
H3_PYCHE4.237e-5885.29Histone H3, embryonic OS=Pycnopodia helianthoides ... [more]
H3_PSAMI4.237e-5885.29Histone H3, embryonic OS=Psammechinus miliaris PE=... [more]
H3_PISOC4.237e-5885.29Histone H3, embryonic OS=Pisaster ochraceus PE=2 S... [more]
H3_PISBR4.237e-5885.29Histone H3, embryonic OS=Pisaster brevispinus PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404319 ID=DR404319; Name=DR404319; organism=Citrus sinensis; type=EST; length=709bp
GGGGATCTCCCCATCTTCCAATTTTCATTCATATTTTAAGATCTCCCAAG
NNNAAAGAAACACTTAATTTCCCAAATCAATGGCCCGCACGAAGCAAACC
GCTCGCAAGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCAA
GGCGGCAAGGAAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCACA
GGTTCCGTCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAAG
AGCACTGAGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGGA
AATCGCTCAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTTG
CTGCACTTCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGAC
ACCAACCTCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGGA
CATTCAGCTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGGAACTTTCTG
ATTTAATGTATTTTGTTCCTCTTACTTCGATGTTAGTCTTTTGGTCAATA
TTTGGGGTTTAGATTTATGTTTTGGATGTCTATCCGATGGATTAGATCGG
GTCTAGTATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAA
TCTAATAGATAATTAGCCTTTTAATAAAAAAACAAAAAAAAAAAAAAAAA
AAAAAAAAA
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