CX070289

Overview
NameCX070289
Unique NameCX070289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.938e-16
Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 1
Query:   85 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            +++   ++ F   DKD  G I  +E      SL Q  T      MI   D DG G +DF EF++ ++      + E++L+ AF+V+D D++G+IS  EL  V+     +NL ++   + VD+ I EAD+D DG+I++EEF K++
Sbjct:   21 EEVDRLRKRFMKLDKDNSGTIEREEF----LSLPQISTNPLATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIVDKTIMEADLDKDGKISFEEFTKMV 160          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CML33_ARATH (Probable calcium-binding protein CML33 OS=Arabidopsis thaliana GN=CML33 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15
Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  106 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT--DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 480
            + F  FD   DG I+ +E    + +L  +    +L +M  ++D +G+G +D  +F + M +  + +  D E+ELK+AF+++D + +G ISA EL  VMT LGEK T E    M++  DVDGDG I +
Sbjct:    8 DIFERFDTSKDGKISWEEFRDAIHALSPSIPSEKLVEMFIQLDTNGDGQVDAAKFASCMDQTAQSSGGDVEKELKDAFKLYDINCDGKISANELHVVMTRLGEKCTVESCVGMVQAIDVDGDGYIRF 134          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15
Identity = 53/155 (34.19%), Postives = 90/155 (58.06%), Query Frame = 1
Query:   64 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVMMAK 510
            +A Q  D  + + K  F + D+DG G IT ++L   +   G   P   +L  +++++D+DG+G ID+ EF+   A   +   S++ +  AFRVFD D +G I+ AEL H++ N  +K  +T  +V+    MIR+ D + DG+I++ EF ++M  K
Sbjct:  411 IAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKLK 561          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   79 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            T  +I +  + F   DKDG+G I+  E   ++  L  NP    ++ +I+  D +G+G+++F EF+  ++      D + +L+ AF+V+D D +G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF K +
Sbjct:   23 TQKEIKKLYKRFKKLDKDGNGTISKDEF-LMIPELAVNPL---VKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKISFEEFAKTL 164          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: MLRA_HUMAN (Myosin regulatory light chain 2, atrial isoform OS=Homo sapiens GN=MYL7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   88 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV++M     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYII 167          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15
Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:   64 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 510
            M  ++ D    EFK+ +   D + DG ++  EL  +M     +  E E Q +I  VD + +G + F EFL  M    K+   S +E+K+ F   DKD NG IS  EL   +  +  KL +   +++I+EAD DGDG +N EEFV  ++AK
Sbjct:   12 MPKEVIDAMKQEFKDNY---DTNKDGTVSCAELAKLM-----DCPEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAK 153          

HSP 2 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 1
Query:   97 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV-FDKDQNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 492
            E K+ F   DKDG+G I+  EL   +  +     E     +I E D DG+G ++  EF++ +  K+         K+ F   FDK+ +G ++ AE+  ++  NL  + ++E ++EMI   D++GDG++ + EF+
Sbjct:   89 EIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAKLPLC-----FKKCFHEDFDKNGDGSLTNAEMSQLLNRNLPGQYSEELINEMISRVDLNGDGRVQFGEFL 217          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.601e-15
Identity = 50/146 (34.25%), Postives = 82/146 (56.16%), Query Frame = 1
Query:   79 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            ++++I   ++ F   D +  G I   E  ++  S+  NP  + L    + VD DG G +DF EF+N ++      + EE+LK AF+++D D++G+IS  EL  V+     TNL E    + VD+ I E D D DG+I++EEF  ++
Sbjct:   19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV 160          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: MLRA_MOUSE (Myosin regulatory light chain 2, atrial isoform OS=Mus musculus GN=Myl7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   88 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV+++     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKSDLKETYSQLGRVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGQGVVNKEEFKQLLMTQADKFSPAEVEQLFALTPMDLAGNIDYKSLCYII 167          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: MLRA_CHICK (Myosin regulatory light chain 2A, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1
Query:   88 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 501
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G  SA     +MT  G + + EE+D+M      D  G ++Y+  V V+
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGLKSAYIKEMLMTQEG-RFSQEEIDQMFAAFPPDVSGNLDYKNLVHVI 158          
BLAST of CX070289 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   79 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 489
            + D+I   ++ F   D D  G + T E  + +  +  NP  + L D+ +E   + +G +DF EF+N ++      + +E+L+ AF+V+D D++G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF
Sbjct:   18 SSDEIDRLRKRFMKLDTDASGILETNEFLS-LPGVAANPLASRLMDVFDE---NHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKISFEEF 155          
The following BLAST results are available for this feature:
BLAST of CX070289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
CANB_NEUCR8.938e-1634.72Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CML33_ARATH1.167e-1537.01Probable calcium-binding protein CML33 OS=Arabidop... [more]
CDPK3_PLAF71.991e-1534.19Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]
CANB1_NAEGR1.991e-1534.25Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
MLRA_HUMAN2.601e-1534.53Myosin regulatory light chain 2, atrial isoform OS... [more]
LPS1B_LYTPI2.601e-1536.00Calcium-binding protein LPS1-beta (Fragment) OS=Ly... [more]
CANB_SCHPO2.601e-1534.25Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
MLRA_MOUSE3.397e-1533.81Myosin regulatory light chain 2, atrial isoform OS... [more]
MLRA_CHICK3.397e-1535.97Myosin regulatory light chain 2A, cardiac muscle i... [more]
CANB_YARLI3.397e-1533.80Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15H07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15H07-P13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070289 ID=CX070289; Name=CX070289; organism=Citrus sinensis; type=EST; length=831bp
TTGTAAGGAAAAAAATAAATAAATACCTATTTCTGAGTTGAAAAAACAAA
CGGAAGAAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGT
TCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACC
ACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGA
GGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAA
CTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGAT
ACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGA
TCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACC
TAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCT
GATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTAT
GATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGAC
TAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGAT
AGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGG
CCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGAC
TCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTTCTATGA
ATGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGCGATGTT
TATTTTTCTTTTGGTCGAAATATGTATCCTA
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