DR404311

Overview
NameDR404311
Unique NameDR404311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Dictyostelium discoideum GN=ndufv2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.391e-44
Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 3
Query:  114 QASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            Q++ + S AL+ H+++ DNN   P+ F+  N  KV++IL+ YP  Y+QSA+IPLLDLAQ+Q+GGW+ + AM++VA I  +AP+  YEVA+FY+MFNR+K+G+  + VC TTPCM+RGS EI      HLG++  E T D  F++ E+EC+G CVNAPM+ + D          ++YED
Sbjct:   28 QSTLTRSDALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQRQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGSGEIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCIND----------DFYED 195          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICTY (NADH-quinone oxidoreductase subunit E OS=Rickettsia typhi GN=nuoE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37
Identity = 76/152 (50.00%), Postives = 101/152 (66.45%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            F   N    + I+  YP N K+SA++PLLDLAQ+Q+GGWL +SA+  VA ++E+  +R YEVATFYSMFN S VGKYH+ VC TTPC +RGS +I     K L +K  E TKD  F++ E+EC+G CVNAP++ + D          +YYED
Sbjct:   12 FDKKNLNLAETIIKKYPPNGKRSAILPLLDLAQRQNGGWLHISAIEYVANMLEMPYMRAYEVATFYSMFNLSPVGKYHIQVCTTTPCWLRGSDDIMKICEKKLAIKHKETTKDQKFTLSEIECLGACVNAPVVQIND----------DYYED 153          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICCN (NADH-quinone oxidoreductase subunit E OS=Rickettsia conorii GN=nuoE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37
Identity = 76/152 (50.00%), Postives = 102/152 (67.11%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            F   N    +EI+  YP + K+SA++PLLDLAQ+Q+GGWLPV A+  VA ++ +  IR YEVATFY+MFN  +VGKYH+ VC TTPC +RGS +I     K LGVK  E T+D  F++ E+EC+G CVNAP++ + D          +YYED
Sbjct:   10 FDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLAMPYIRAYEVATFYTMFNLKRVGKYHIQVCTTTPCWLRGSDDIMKICEKKLGVKLKETTEDQKFTLSEIECLGACVNAPVVQIND----------DYYED 151          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICFE (NADH-quinone oxidoreductase subunit E OS=Rickettsia felis GN=nuoE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.822e-37
Identity = 74/152 (48.68%), Postives = 102/152 (67.11%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            F   N    ++I+  YP + K+SA++PLLDLAQ+Q+GGWLPV A+  VA ++E+  +R YEVATFYSMFN  +VGKYH+ VC TTPC + GS +I     K LG+K  E T+D  F++ E+EC+G CVNAP++ + D          +YYED
Sbjct:    7 FDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQKFTLSEIECLGACVNAPVVQIND----------DYYED 148          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICBR (NADH-quinone oxidoreductase subunit E OS=Rickettsia bellii (strain RML369-C) GN=nuoE PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36
Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 3
Query:  186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            + F   N    ++I+  YP   K+SA++PLLDLAQ+Q+GGWLPV A+  VA ++E+  +R YEVATFY+MFN   VGK H+ VC TTPC +RGS +I     + LG+K  EVTKD  FS+ E+EC+G CVNAP++ + D          +YYED
Sbjct:    8 FSFDKKNLSLAEDIIKKYPPEGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYTMFNLKPVGKNHIQVCTTTPCWLRGSDDIMKTCKEKLGIKDEEVTKDQKFSLIEIECLGACVNAPVVQIND----------DYYED 151          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICPR (NADH-quinone oxidoreductase subunit E OS=Rickettsia prowazekii GN=nuoE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36
Identity = 73/152 (48.03%), Postives = 99/152 (65.13%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647
            F   N    + I+  YP   K+SA++PLLDLAQ+Q+GGWL VSA+  VA ++E+  +R YEVATFY+MFN + +GKYH+ VC TTPC +RGS  I     K L +K  E TKD  F++ E+EC+G CVNAP++ + D          +YYED
Sbjct:   12 FDKKNLNLAETIIKKYPPEGKRSAILPLLDLAQRQNGGWLHVSAIEYVANMLEMPYMRAYEVATFYTMFNLNPIGKYHIQVCTTTPCWLRGSDNIMKICEKKLAIKHKETTKDQKFTLSEIECLGACVNAPVVQIND----------DYYED 153          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NQO2_THET8 (NADH-quinone oxidoreductase subunit 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo2 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24
Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVAD 602
            F D  ++ ++E  + YP   +++A++PLL   QQ+ G W+    + E+A+++   P  V  VA+FYS +     GKYHL VC T  C + G+ E+ D L + LG+   EVT DGLFSV ++EC+G C  AP+I V D
Sbjct:    3 FFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEG-WIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVND 138          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE2_RHIME (NADH-quinone oxidoreductase subunit E 2 OS=Rhizobium meliloti GN=nuoE2 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23
Identity = 52/139 (37.41%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  201 TNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGS 617
            T +E+++   + YP   ++SA++P L +AQ++HG  LP   + EVA+I+ V  + VYE+ATFY++F+   +G++HL +C    CM+ GS  +   L   LG+++ E T DG F++  +EC+G C  AP++ V D  +G+
Sbjct:    2 TMREEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLGACEMAPVMQVGDDYHGN 137          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE1_RHIME (NADH-quinone oxidoreductase subunit E 1 OS=Rhizobium meliloti GN=nuoE1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = 3
Query:  192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVG-KYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596
            FS  N    +  +  YP   +QSAVIPLL  AQ+Q G W+  +A+  VA ++ +A IRV EVATFY+ F    VG + H+ VCGTTPCM+RG+ ++     K +  +   + + G  S  E+EC G CVNAPM+ +
Sbjct:   18 FSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLSWEEVECQGACVNAPMVMI 152          
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NQO2_PARDE (NADH-quinone oxidoreductase chain 2 OS=Paracoccus denitrificans GN=nqo2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3
Query:  186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKY-HLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596
            ++F+  N E  +  ++ YP   +QSA+IP+L  AQ+Q G WL   A+   A ++ +  IR  EVATFY MF    VG   H+ +CGTT CM+ G+ ++     + +  + + ++ DG FS  E+EC+G C NAPM  +
Sbjct:   13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFSWEEVECLGACTNAPMAQI 149          
The following BLAST results are available for this feature:
BLAST of DR404311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
NDUV2_DICDI9.391e-4447.75NADH dehydrogenase [ubiquinone] flavoprotein 2, mi... [more]
NUOE_RICTY1.715e-3750.00NADH-quinone oxidoreductase subunit E OS=Rickettsi... [more]
NUOE_RICCN1.715e-3750.00NADH-quinone oxidoreductase subunit E OS=Rickettsi... [more]
NUOE_RICFE3.822e-3748.68NADH-quinone oxidoreductase subunit E OS=Rickettsi... [more]
NUOE_RICBR1.452e-3648.70NADH-quinone oxidoreductase subunit E OS=Rickettsi... [more]
NUOE_RICPR7.207e-3648.03NADH-quinone oxidoreductase subunit E OS=Rickettsi... [more]
NQO2_THET82.175e-2440.15NADH-quinone oxidoreductase subunit 2 OS=Thermus t... [more]
NUOE2_RHIME4.102e-2337.41NADH-quinone oxidoreductase subunit E 2 OS=Rhizobi... [more]
NUOE1_RHIME6.997e-2342.65NADH-quinone oxidoreductase subunit E 1 OS=Rhizobi... [more]
NQO2_PARDE1.905e-2037.68NADH-quinone oxidoreductase chain 2 OS=Paracoccus ... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245O21 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245O21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404311 ID=DR404311; Name=DR404311; organism=Citrus sinensis; type=EST; length=685bp
GGGGACCAAATCTGTGGCGTCACTCTTGTTGAGCTTAGAACTCGTCGAAA
ATGCTAGCTCGTCTCGCGGCCAAGCGTCTTCTCGAGATTCGTCAAGCAAT
CCGTCCATCTCTTCAGGCATCTCGATCTTTCTCCACTGCCCTGAACTATC
ATCTTGATTCTCCAGATAACAATCCGGACCTTCCGTGGAAGTTCTCTGAT
ACAAACAAAGAAAAGGTTAAGGAGATATTGTCTCACTATCCATCCAATTA
CAAGCAATCTGCTGTCATTCCACTGCTAGATCTTGCACAGCAGCAGCATG
GAGGGTGGCTTCCTGTTTCAGCAATGAATGAGGTAGCTAAAATTATAGAG
GTTGCTCCCATCCGTGTATATGAGGTTGCAACATTTTATTCAATGTTCAA
CAGATCAAAGGTAGGCAAATACCACCTACTGGTCTGTGGCACAACACCTT
GTATGGTACGTGGTTCACGAGAAATTGAAGATGCCTTACTGAAACACTTG
GGCGTGAAGCGCAATGAAGTAACTAAGGATGGCTTGTTCTCTGTTGGAGA
AATGGAATGCATGGGATGCTGTGTAAACGCTCCTATGATTACAGTGGCTG
ATTACTCCAATGGATCTGAAGGATATACTTACAATTATTATGAAGATGGT
CACTCCGAAACGAGTTATTGAGATAGTTGAANNGT
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