DR404311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Dictyostelium discoideum GN=ndufv2 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.391e-44 Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 3 Query: 114 QASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 Q++ + S AL+ H+++ DNN P+ F+ N KV++IL+ YP Y+QSA+IPLLDLAQ+Q+GGW+ + AM++VA I +AP+ YEVA+FY+MFNR+K+G+ + VC TTPCM+RGS EI HLG++ E T D F++ E+EC+G CVNAPM+ + D ++YED Sbjct: 28 QSTLTRSDALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQRQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGSGEIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCIND----------DFYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICTY (NADH-quinone oxidoreductase subunit E OS=Rickettsia typhi GN=nuoE PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 76/152 (50.00%), Postives = 101/152 (66.45%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 F N + I+ YP N K+SA++PLLDLAQ+Q+GGWL +SA+ VA ++E+ +R YEVATFYSMFN S VGKYH+ VC TTPC +RGS +I K L +K E TKD F++ E+EC+G CVNAP++ + D +YYED Sbjct: 12 FDKKNLNLAETIIKKYPPNGKRSAILPLLDLAQRQNGGWLHISAIEYVANMLEMPYMRAYEVATFYSMFNLSPVGKYHIQVCTTTPCWLRGSDDIMKICEKKLAIKHKETTKDQKFTLSEIECLGACVNAPVVQIND----------DYYED 153
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICCN (NADH-quinone oxidoreductase subunit E OS=Rickettsia conorii GN=nuoE PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 76/152 (50.00%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 F N +EI+ YP + K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++ + IR YEVATFY+MFN +VGKYH+ VC TTPC +RGS +I K LGVK E T+D F++ E+EC+G CVNAP++ + D +YYED Sbjct: 10 FDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLAMPYIRAYEVATFYTMFNLKRVGKYHIQVCTTTPCWLRGSDDIMKICEKKLGVKLKETTEDQKFTLSEIECLGACVNAPVVQIND----------DYYED 151
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICFE (NADH-quinone oxidoreductase subunit E OS=Rickettsia felis GN=nuoE PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.822e-37 Identity = 74/152 (48.68%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 F N ++I+ YP + K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++E+ +R YEVATFYSMFN +VGKYH+ VC TTPC + GS +I K LG+K E T+D F++ E+EC+G CVNAP++ + D +YYED Sbjct: 7 FDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQKFTLSEIECLGACVNAPVVQIND----------DYYED 148
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICBR (NADH-quinone oxidoreductase subunit E OS=Rickettsia bellii (strain RML369-C) GN=nuoE PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36 Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 + F N ++I+ YP K+SA++PLLDLAQ+Q+GGWLPV A+ VA ++E+ +R YEVATFY+MFN VGK H+ VC TTPC +RGS +I + LG+K EVTKD FS+ E+EC+G CVNAP++ + D +YYED Sbjct: 8 FSFDKKNLSLAEDIIKKYPPEGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYTMFNLKPVGKNHIQVCTTTPCWLRGSDDIMKTCKEKLGIKDEEVTKDQKFSLIEIECLGACVNAPVVQIND----------DYYED 151
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_RICPR (NADH-quinone oxidoreductase subunit E OS=Rickettsia prowazekii GN=nuoE PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36 Identity = 73/152 (48.03%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 F N + I+ YP K+SA++PLLDLAQ+Q+GGWL VSA+ VA ++E+ +R YEVATFY+MFN + +GKYH+ VC TTPC +RGS I K L +K E TKD F++ E+EC+G CVNAP++ + D +YYED Sbjct: 12 FDKKNLNLAETIIKKYPPEGKRSAILPLLDLAQRQNGGWLHVSAIEYVANMLEMPYMRAYEVATFYTMFNLNPIGKYHIQVCTTTPCWLRGSDNIMKICEKKLAIKHKETTKDQKFTLSEIECLGACVNAPVVQIND----------DYYED 153
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NQO2_THET8 (NADH-quinone oxidoreductase subunit 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo2 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24 Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVAD 602 F D ++ ++E + YP +++A++PLL QQ+ G W+ + E+A+++ P V VA+FYS + GKYHL VC T C + G+ E+ D L + LG+ EVT DGLFSV ++EC+G C AP+I V D Sbjct: 3 FFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEG-WIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVND 138
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE2_RHIME (NADH-quinone oxidoreductase subunit E 2 OS=Rhizobium meliloti GN=nuoE2 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 52/139 (37.41%), Postives = 89/139 (64.03%), Query Frame = 3 Query: 201 TNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGS 617 T +E+++ + YP ++SA++P L +AQ++HG LP + EVA+I+ V + VYE+ATFY++F+ +G++HL +C CM+ GS + L LG+++ E T DG F++ +EC+G C AP++ V D +G+ Sbjct: 2 TMREEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLGACEMAPVMQVGDDYHGN 137
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE1_RHIME (NADH-quinone oxidoreductase subunit E 1 OS=Rhizobium meliloti GN=nuoE1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 192 FSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVG-KYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 FS N + + YP +QSAVIPLL AQ+Q G W+ +A+ VA ++ +A IRV EVATFY+ F VG + H+ VCGTTPCM+RG+ ++ K + + + + G S E+EC G CVNAPM+ + Sbjct: 18 FSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLSWEEVECQGACVNAPMVMI 152
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NQO2_PARDE (NADH-quinone oxidoreductase chain 2 OS=Paracoccus denitrificans GN=nqo2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKY-HLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 ++F+ N E + ++ YP +QSA+IP+L AQ+Q G WL A+ A ++ + IR EVATFY MF VG H+ +CGTT CM+ G+ ++ + + + + ++ DG FS E+EC+G C NAPM + Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFSWEEVECLGACTNAPMAQI 149 The following BLAST results are available for this feature:
BLAST of DR404311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404311 ID=DR404311; Name=DR404311; organism=Citrus sinensis; type=EST; length=685bpback to top |