DR404311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_AQUAE (NADH-quinone oxidoreductase subunit E OS=Aquifex aeolicus GN=nuoE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15 Identity = 43/139 (30.94%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVAD 602 ++F + K K++E ++++P +Q+ ++ L ++ Q + G++P ++ +A ++E+ V V FY MF+R KY + VC + C + G+ ++ AL LG+K EVT DG F + ++C+G C AP+ V D Sbjct: 6 FEFPEELKTKLQEHINYFPKK-RQAILLCLHEI--QNYYGYIPPESLKPLADMLELPLNHVEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKIVPVQCLGACSEAPVFMVND 141
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_MYCTU (NADH-quinone oxidoreductase subunit E OS=Mycobacterium tuberculosis GN=nuoE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 219 KEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 KEI+ YP ++SA++PLL L Q + +L + + A + + V VA+FY+M+ R G+Y + VC T C V G I D L +HLGV +E T DG+ ++ +EC C AP++ V Sbjct: 45 KEIIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLTGAEVSAVASFYTMYRRRPTGEYLVGVCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGVVTLQHIECNAACDYAPVVMV 167
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_MYCBO (NADH-quinone oxidoreductase subunit E OS=Mycobacterium bovis GN=nuoE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 219 KEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 KEI+ YP ++SA++PLL L Q + +L + + A + + V VA+FY+M+ R G+Y + VC T C V G I D L +HLGV +E T DG+ ++ +EC C AP++ V Sbjct: 45 KEIIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLTGAEVSAVASFYTMYRRRPTGEYLVGVCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGVVTLQHIECNAACDYAPVVMV 167
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_PSEAE (NADH-quinone oxidoreductase subunit E OS=Pseudomonas aeruginosa GN=nuoE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 41/140 (29.29%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 195 SDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNG 614 S+T + ++ + HY ++A I L + Q+Q G W+P A+ + +++ + V VATFYS R VG++ + VC + C + G + + K LG+ + T DG F++ + C+G C AP + + D ++G Sbjct: 15 SETERSSIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIPAIGEVLGIPASDVEGVATFYSQIFRQPVGRHIIRVCDSMVCYIGGHESVVGEIQKQLGIGLGQTTADGRFTLLPVCCLGNCDKAPALMIDDDTHG 151
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_BUCBP (NADH-quinone oxidoreductase subunit E OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nuoE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 177 DLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVAD--YSNGSE 620 D+ +K + K ++ I+ +Y + +S++I +L Q+ +G W+ + E+A I++++ + E+ATFYS R +G+ + C + C V G +I +L K+L V E TKD F++ + C+G C +P I + D YSN +E Sbjct: 14 DIKFKLTIQEKIEIFNIIKNYRT--VRSSLIEILKFVQKSYG-WISNELITELACILKISKCDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCEKIRCSLEKNLNVNVGETTKDFKFTLLPICCLGNCDKSPTIMINDDLYSNVTE 160
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_SHIFL (NADH-quinone oxidoreductase subunit E OS=Shigella flexneri GN=nuoE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 ++ S +E ++ + HY ++A I L + Q+Q G W+P A++ +A ++ + V VATFYS R VG++ + C + C + G + I+ AL K L +K + T DG F++ C+G C P + + Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMI 145
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_ECOLI (NADH-quinone oxidoreductase subunit E OS=Escherichia coli (strain K12) GN=nuoE PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 ++ S +E ++ + HY ++A I L + Q+Q G W+P A++ +A ++ + V VATFYS R VG++ + C + C + G + I+ AL K L +K + T DG F++ C+G C P + + Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMI 145
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_ECOL6 (NADH-quinone oxidoreductase subunit E OS=Escherichia coli O6 GN=nuoE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 186 WKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 ++ S +E ++ + HY ++A I L + Q+Q G W+P A++ +A ++ + V VATFYS R VG++ + C + C + G + I+ AL K L +K + T DG F++ C+G C P + + Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMI 145
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_SALTY (NADH-quinone oxidoreductase subunit E OS=Salmonella typhimurium GN=nuoE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 219 KEILSHYPSNYK--QSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 +E + H +Y+ ++A I L + Q+Q G W+P A+ +A ++ + V VATFYS R VG++ + C + C + G + I+ AL K+L +K + T DG F++ C+G C P + + Sbjct: 19 REAIEHEKHHYEDPRAASIEALKIVQKQRG-WVPDGAIYAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAALEKNLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMI 145
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NUOE_SALTI (NADH-quinone oxidoreductase subunit E OS=Salmonella typhi GN=nuoE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 219 KEILSHYPSNYK--QSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 596 +E + H +Y+ ++A I L + Q+Q G W+P A+ +A ++ + V VATFYS R VG++ + C + C + G + I+ AL K+L +K + T DG F++ C+G C P + + Sbjct: 19 REAIEHEKHHYEDPRAASIEALKIVQKQRG-WVPDGAIYAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAALEKNLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMI 145 The following BLAST results are available for this feature:
BLAST of DR404311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404311 ID=DR404311; Name=DR404311; organism=Citrus sinensis; type=EST; length=685bpback to top |