CX070280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_GLOIN (1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24 Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQV 480 YLNF GNEFGHP+ ++FP NN SF A R W+++ + L + L FD+ + L+E L + ++ ++ + RG L++IFNF PT S+ DY +G E AG+Y I LNTD FGG I E + DG +N I+V +P R A V Sbjct: 520 YLNFEGNEFGHPEWLDFPRAGNNNSFHYARRQWNVVDDDLLRYKYLNEFDKAMQHLEEQYGWLSSPQAYISLKHNENKLVAFERGNLLWIFNFLPTQSFADYKIGTEWAGKYSIALNTDRKIFGGHDRIDE-SISYHSQPHEWDGRKNYIQVYIPCRVAPV 679
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23 Identity = 52/129 (40.31%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLA--NRLHSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLI 384 YLNFMGNEFGHP+ ++FP NN+S+ R W L+ + + + +FDQ + L+E L V +N+ VI + RG LVF+FNFHP +Y+ Y VG + G+Y++ L++D FGG G + Sbjct: 587 YLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRV 715
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.939e-22 Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG 372 YLNFMGNEFGHP+ ++FP NN S+ A R + L + L + L +FD+++ KL+E L V ++ +I + R LVFIFNFHP+ SY DY VG G+++I+L+TD +++GG Sbjct: 532 YLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNKLEERCGWLSAPQAFVSEKHEGNKIIAFERAGLVFIFNFHPSKSYTDYRVGTTLPGKFRIVLDTDAAEYGG 656
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22 Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG-QGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQV 480 YLNFMGNEFGHP+ ++FP NN S+ A R ++L + L + L +FD+++ +L+E L V ++A I + R L+FIFNFHP+ SY DY VG G+++I+L++D +++GG Q L Y +G + V +PSR A + Sbjct: 535 YLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFNLTDDDLLRYKFLNNFDRDMNRLEERCGWLSAPQAYVSEKHEANKTITFERAGLLFIFNFHPSKSYTDYRVGTATPGKFKIVLDSDAAEYGGHQRLDHNTNYFAEAFEH--NGRPYSLLVYIPSRVALI 694
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_DICDI (1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum GN=glgB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22 Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVYK 486 YLNFMGNEFGHP+ V+FP NN S A R WDL N L + L FD + K ++ + L + ++ +I + R L+FIFNFHP+ S+ DY +G G++ +L++D +FGG I + Y T K + + + +PSRT V K Sbjct: 514 YLNFMGNEFGHPEWVDFPREGNNNSLHHARRRWDLYRNPLLRYKQLRDFDIAMNKAEQEFRWLSSDFAYISLKHEDDKIIVFERASLIFIFNFHPSKSFSDYRIGSGVPGKFINVLDSDRKEFGGHVRIGKDNY-HYTEDKPWHDRKYSLLIYIPSRTCLVLK 675
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_HUMAN (1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.800e-21 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG-QGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQV 480 YLNFMGNEFGHP+ ++FP NN S+ A R + L + L + L +FD+++ +L+E L V ++ +I + R L+FIFNFHP+ SY DY VG G+++I+L++D +++GG Q L + +G + V +PSR A + Sbjct: 535 YLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEH--NGRPYSLLVYIPSRVALI 694
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.800e-21 Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG 372 YLNFMGNEFGHP+ ++FP NN S+ A R + L + L + L +FD+++ KL+E L V ++ VI + R L+FIFNFHP+ SY +Y VG G+++I+L++D +++GG Sbjct: 532 YLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNKLEERCGWLSAPQAFVSEKHEGNKVIAFERAALLFIFNFHPSKSYTNYRVGTTLPGKFKIVLDSDAAEYGG 656
BLAST of CX070280 vs. ExPASy Swiss-Prot
Match: GLGB_MAIZE (1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.043e-20 Identity = 60/173 (34.68%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 4 YLNFMGNEFGHPKRVEFP-----------MPSNNFSFSLANRHWDLL-ANRL-HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVY 483 YLNFMGNEFGHP+ ++FP +P NN S+ R +DL A+ L + + FDQ + L++ + + + ++ VI + +G LVF+FNFH +SY DY +G + G Y+++L++D FGG I H T D V PSRT VY Sbjct: 624 YLNFMGNEFGHPEWIDFPRGPQRLPSGKFIPGNNNSYDKCRRRFDLGDADYLRYHGMQEFDQAMQHLEQKYEFMTSDHQYISRKHEEDKVIVFEKGDLVFVFNFHCNNSYFDYRIGCRKPGVYKVVLDSDAGLFGGFSRI-HHAAEHFTADCSHDNRPYSFSVYTPSRTCVVY 795 The following BLAST results are available for this feature:
BLAST of CX070280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070280 ID=CX070280; Name=CX070280; organism=Citrus sinensis; type=EST; length=776bpback to top |