CX070279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070279 vs. ExPASy Swiss-Prot
Match: GLGB_SOLTU (1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 531 FSLANRHWDLLANR--LHSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQG 830 + R W+L + + + +FD+ + LDE L G V ++D V+ + RG LVF+FNFHP ++YE Y VG + G+Y++ L++D +FGG G Sbjct: 632 YDKCRRQWNLADSEHLRYKFMNAFDRAMNSLDEKFSFLASGKQIVSSMDDDNKVVVFERGDLVFVFNFHPKNTYEGYKVGCDLPGKYRVALDSDAWEFGGHG 733
BLAST of CX070279 vs. ExPASy Swiss-Prot
Match: GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11 Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = -3 Query: 525 FSLANRHWDLLA--NRLHSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLI 830 + R W L+ + + + +FDQ + L+E L V +N+ VI + RG LVF+FNFHP +Y+ Y VG + G+Y++ L++D FGG G + Sbjct: 612 YDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRV 715
BLAST of CX070279 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = -3 Query: 537 LYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG 776 L +FD+++ KL+E L V ++ +I + R LVFIFNFHP+ SY DY VG G+++I+L+TD +++GG Sbjct: 577 LNNFDRDMNKLEERCGWLSAPQAFVSEKHEGNKIIAFERAGLVFIFNFHPSKSYTDYRVGTTLPGKFRIVLDTDAAEYGG 656
BLAST of CX070279 vs. ExPASy Swiss-Prot
Match: GLGB_DICDI (1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum GN=glgB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11 Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = -3 Query: 423 ANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVYK 821 A R WDL N L + L FD + K ++ + L + ++ +I + R L+FIFNFHP+ S+ DY +G G++ +L++D +FGG I + Y T K + + + +PSRT V K Sbjct: 542 ARRRWDLYRNPLLRYKQLRDFDIAMNKAEQEFRWLSSDFAYISLKHEDDKIIVFERASLIFIFNFHPSKSFSDYRIGSGVPGKFINVLDSDRKEFGGHVRIGKDNY-HYTEDKPWHDRKYSLLIYIPSRTCLVLK 675
BLAST of CX070279 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11 Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = -3 Query: 429 FSLANRHWDLLANRL--HSNLYSFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGG-QGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQV 830 + A R ++L + L + L +FD+++ +L+E L V ++A I + R L+FIFNFHP+ SY DY VG G+++I+L++D +++GG Q L Y +G + V +PSR A + Sbjct: 560 YHYARRQFNLTDDDLLRYKFLNNFDRDMNRLEERCGWLSAPQAYVSEKHEANKTITFERAGLLFIFNFHPSKSYTDYRVGTATPGKFKIVLDSDAAEYGGHQRLDHNTNYFAEAFEH--NGRPYSLLVYIPSRVALI 694 The following BLAST results are available for this feature:
BLAST of CX070279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070279 ID=CX070279; Name=CX070279; organism=Citrus sinensis; type=EST; length=832bpback to top |