CX070278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.704e-39 Identity = 92/182 (50.55%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 ME LI LVNK+Q A +++G LP IA LE+ VG+DFLPRGSGIVTRRPL+LQL E+AEFLH K+FTDF VR+EI+ ETDR TG K IS VPI+L +YSP+V+NLTLIDLPG+TKV V QP I I++M+ +I + + +ILA++P Sbjct: 6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIF---SKTEHAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTP 176
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.350e-36 Identity = 91/221 (41.18%), Postives = 126/221 (57.01%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL--------------------------EEGSR-------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +E+LI VNK+Q D S + TL LP +A LE++VG+DFLPRG+GIVTRRPLVLQL+ + E G++ E+ EFLHIP KRF DF +++EI++ET R G+ K IS +PI+L ++SP+V+NLTL+DLPG+TKV + QP I + I+N++ YI PNC+ILA+SP Sbjct: 4 LEDLIPTVNKLQ-------DVMYDSGIDTL--DLPILAVVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVLQLNNISPNSPLIEEDDNSVNPHDEVTKISGFEAGTKPLEYRGKERNHADEWGEFLHIPGKRFYDFDDIKREIENETARIAGKDKGISKIPINLKVFSPHVLNLTLVDLPGITKVPIGEQPPDIEKQIKNLILDYIATPNCLILAVSP 215
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.928e-36 Identity = 92/221 (41.63%), Postives = 119/221 (53.85%), Query Frame = 3 Query: 219 ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-----------------------------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 E+LIS +NK+Q A LG ++ LP I LE+IVG+DFLPRG+GIVTRRPLVLQL + E+ E+ EFLH+P K+F +F +RKEI ETD+ TG ISSVPI+L IYSP+V+ LTL+DLPGLTKV V QP I + I++M+ YI KPN IIL+++ Sbjct: 3 EHLISTINKLQDALAPLGGGSQSPI------DLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRRPKKSEHAKVNQTANELIDLNINDDDKKKDESGKHQNEGQSEDNKEEWGEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDMLLKYISKPNAIILSVN 217
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.493e-35 Identity = 90/197 (45.69%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 222 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 +LI +VN++Q A + +G + L D LP I LE+IVG+DFLPRG+GIVTRRPLVLQL K + S E+ EFLH+P ++F +F +R+EI ET+ +TG+ ISSVPI+L IYSP+V+ LTL+DLPGLTKV V QP I + I MV YI K N IILA++ Sbjct: 4 SLIKVVNQLQEAFSTVG-------VQNLID-LPQITVVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRPSASGKNEETTTDSDGKDQNNSSEWGEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMVLKYISKNNAIILAVN 192
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.493e-35 Identity = 86/193 (44.56%), Postives = 114/193 (59.07%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 ME LI ++NK+Q +G A + LP IA LES+VG+D LPRG+GIVTRRPL+LQL ++ R E+ +FLH K +TDF +R+EI++ET+R +G K IS PIHL I+SP+VVNLTL+DLPG+TKV V QP I I ++ YI PN IILA++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVDPEDRRKTSEENGVDGEEWGKFLHTKNKIYTDFDEIRQEIENETERVSGNNKGISDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIELQIRELILKYISNPNSIILAVT 184
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.343e-35 Identity = 86/194 (44.33%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+GIVTRRPL+LQL H +E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL I+SPNVVNLTL+DLPG+TKV V QP I I ++ +I PN IILA++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSQEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVT 185
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.155e-34 Identity = 85/203 (41.87%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 171 LPPPSPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGS-----REYAEFLHI-PRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 LPP S T L ++I +VNK+Q LG + LP +A LE++VG+DFLPRG+ I TRRPL LQL + + S E+ EFLH P +R DF+ +R+EI+ ET+R +G K +S +PI L I+SPNV++++L+DLPG+TKV V QP I I M+ +YI++P+C+ILA+SP Sbjct: 6 LPPSSASAVTPLGS---SVIPIVNKLQDIFAQLGSQSTIA--------LPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITKVPVGDQPSDIEARIRTMILTYIKEPSCLILAVSP 197
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 93/218 (42.66%), Postives = 116/218 (53.21%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL-------------------------EEGSRE-----------YAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 ME LI LVN++Q + + + + LP+I LE+IVGKDFLPRG+GIVTRRPL+LQL L E GS E YAEFLHIP +FTD VR EI++ET R G K I+ +PI+L IYS V+NLTLIDLPGLTK+ V QP I +++ YI +PN IILA+SP Sbjct: 1 MEQLIPLVNQLQDLVY--------NTIGSDFLDLPSIVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHIPDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRSLIMEYISRPNSIILAVSP 210
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 3 Query: 180 PSPEIST*LREKM-ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR-----EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 PSP ST + ++I +VNK+Q LG + LP + LE++VG+DFLPRG+ I TRRPLVLQL + + + E+ EF H+P RF DF+ +R+EI+ ET+R G K ++ I L I SPNV+N+TL+DLPG+TKV V QP I I M+ SYI++ C+ILA++P Sbjct: 21 PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIA--------LPQVVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITKVPVGDQPSDIEARIRTMILSYIKQDTCLILAVTP 212
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 8.191e-34 Identity = 84/200 (42.00%), Postives = 113/200 (56.50%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+G+VTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL ++SPNVVNLTL+DLPG+TKV V QP I I ++ +I PN IILA++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENGKFQSWRVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVT 191 The following BLAST results are available for this feature:
BLAST of CX070278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070278 ID=CX070278; Name=CX070278; organism=Citrus sinensis; type=EST; length=761bpback to top |