CX070278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.383e-33 Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+GIVTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL I+SPNVVNLTL+DLPG+TKV V QP I I ++ +I PN IILA++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVAPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVT 198
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.309e-33 Identity = 84/207 (40.58%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 216 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAIS 758 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+G+VTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL ++SPNVVNLTL+DLPG+TKV V QP I I ++ +I PN IILA++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVT 198
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32 Identity = 85/206 (41.26%), Postives = 113/206 (54.85%), Query Frame = 3 Query: 222 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR--------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +L+ ++NK+Q +G +LP I LE++VG+DFLPRGSG+VTRRPLVLQL++ SR E+ EF H RF +F +++EI+ ET+R G K ISS PI L IYSP VV LTL+DLPGLT+VA+E QP I + I++M+ YI PN IILAI+P Sbjct: 136 SLLPIINKLQENAALIGSE----------ITLPQIIVVGSQSSGKSSVLENLVGRDFLPRGSGLVTRRPLVLQLYQTTTTSRNNVNENEDEDEDDNYYDNDNDDNSLEEWGEFGHTGTNRF-NFQEIKEEIERETERIAGPNKDISSEPIVLKIYSPKVVPLTLVDLPGLTRVAIEDQPPDIEEKIKSMIIDYISNPNSIILAITP 330
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 61/151 (40.40%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D A V K+I+D D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ +I++ I L + P Sbjct: 34 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRRQEGEEWYGKISYQDCEKEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFIKRQETISLVVVP 183
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.500e-19 Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + EG Y + +I + D A V K+I++ ++ G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ +I K I L + P Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVP 181
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.341e-19 Identity = 73/186 (39.25%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 210 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 E NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KLE+ + + R+ +D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R YI + I L + P Sbjct: 31 ESKGNLYSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLEKEGEWKGKVSFLDREIEISDASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIRKYILRQETINLVVVP 213
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.699e-19 Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 3 Query: 210 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 E ++NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L +L++G + + ++ + + + V +EI + G +ISS I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ YI+K I L + P Sbjct: 27 ESVDNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVP 209
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19 Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + D A V K+I++ D G IS I L I SP V +LTLIDLPG+ +VAV+GQP++I I+ +++++I K I L + P Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVP 181
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19 Identity = 72/187 (38.50%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 207 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +E + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ ++++YI+K I L + P Sbjct: 28 QESVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLNEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVP 211
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.658e-18 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG + + + + D + V K+I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I + I+ ++R +I K I L + P Sbjct: 33 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWHGKISYQDHEEEIEDPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIRKFIMKQETISLVVVP 182 The following BLAST results are available for this feature:
BLAST of CX070278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070278 ID=CX070278; Name=CX070278; organism=Citrus sinensis; type=EST; length=761bpback to top |