CX070278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.658e-18 Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +E + + + + F D A V K+I++ D G IS I L I S NV +LTLIDLPG+ +VAV+GQP++I I+ ++R +I K I L + P Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRSKEDEKWHGRISYQNHEEDFDDPAEVEKKIREAQDEMAGAGVGISEELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRMFITKQETINLVVVP 185
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 91.6633 bits (226), Expect = 4.824e-18 Identity = 76/198 (38.38%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 183 SPEIST*LREKME---NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 SPE S E ME NL S + R C L D +L D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL + + ++ D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R YI + I L + P Sbjct: 13 SPESSLNGSEDMESKSNLYSQYEEKVRPCIDLID--SLRSLGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVP 207
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.300e-18 Identity = 58/151 (38.41%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D + V +I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ +I + I L + P Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVP 181
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 69/187 (36.90%), Postives = 97/187 (51.87%), Query Frame = 3 Query: 207 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ +YI+K I L + P Sbjct: 33 KDSVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLITNYIQKQETINLVVVP 216
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 64/154 (41.56%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL----HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PLVL+L HK G Y + +F D + V KEI+ + G+ IS I L I SP V +LTLIDLPG+T+VAV QP I I+ ++++YI+K I L + P Sbjct: 117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKRDPHKAWRGRISYRK----TELQFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVP 265
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PLVL+L KL+EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ ++++YI+K I L + P Sbjct: 35 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLKEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVP 184
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 69/187 (36.90%), Postives = 97/187 (51.87%), Query Frame = 3 Query: 207 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ +YI+K I L + P Sbjct: 33 KDSLNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVP 216
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.404e-17 Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAI 755 +LP+I LE+IVG +FLP+GS +VTRRP+ L L + + Y EF + + TDF+ + + I + + ++ + PI L+IY+ ++ NL+LIDLPG ++ E QP + I + YI +PN IILA+ Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSADTAIPYGEFSGVQLGKITDFSKI-QHILTDLNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKLCEKYIREPN-IILAV 407
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 56/151 (37.09%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAA-VRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + + A V K+I++ D+ G +I+ I L I SP+V +LTLI LPG+ +VAV+ QP++I I+ +++ +I+K I L + P Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQDYEEEIEVPADVEKKIREAQDKMAGNGVEIADDLISLEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQKFIKKQETINLVVVP 181
BLAST of CX070278 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.127e-17 Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 312 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISP 761 +LPAIA LE++ G LPRGSGIVTR PL L++ + ++ R + + + F D A V K+I+ D G IS I L I S +V +LTLIDLPG+ +VAV+GQP++I I+ ++R ++ + I L + P Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRTKDQDRWHGRISYKTCEEDFDDPAEVEKKIRQAQDEMAGAGVGISEELISLQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTRQETINLVVVP 185 The following BLAST results are available for this feature:
BLAST of CX070278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070278 ID=CX070278; Name=CX070278; organism=Citrus sinensis; type=EST; length=761bpback to top |