CX070272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_SALG2 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=yfaU PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31 Identity = 70/190 (36.84%), Postives = 116/190 (61.05%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMM 827 K L+ +T GL+L S + +AEI+ +GYD++++D EH P + D L A+A + ++RL E K+ LD+G Q ++ PM+D+ E A++ VS R+PP G RG +V RA+ +G + Y++ E L ++ QVES+ ++ + I V+G+D V +GP DLSAS+GY + GH +V+ ++ Sbjct: 10 KEGLREGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRLIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGYPDNAGHPEVQRII 199
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECO57 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O157:H7 GN=yfaU PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOUT (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain UTI89 / UPEC) GN=yfaU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOL6 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O6 GN=yfaU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOK1 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O1:K1 / APEC GN=yfaU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECO81 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O81 (strain ED1a) GN=yfaU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECO45 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=yfaU PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31 Identity = 70/193 (36.27%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E K+ LD+G Q ++ PM+D+ + A++ VS R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_SHISS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Shigella sonnei (strain Ss046) GN=yfaU PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.625e-31 Identity = 69/193 (35.75%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E + K+ LD+G Q ++ PM+D+ + A++ S R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTADQARQVASATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_SHIBS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Shigella boydii serotype 4 (strain Sb227) GN=yfaU PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 69/193 (35.75%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836 K RL+ E GL+L S + +AEI+ +GYD++++D EH P I D L A+A + ++R E + K+ LD+G Q ++ PM+D+ + A++ S R+PP G RG +V RA+ +G E Y++ + L ++ QVES+ + ++I V+G+D V +GP DLSAS+GY + GH +V+ ++ + Sbjct: 10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTADQARQVSSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_SALTY (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella typhimurium GN=yfaU PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.639e-31 Identity = 69/190 (36.32%), Postives = 115/190 (60.53%), Query Frame = 3 Query: 258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMM 827 K L+ +T GL+L S + +AEI+ +GYD++++D EH P + D L A+A + ++R E K+ LD+G Q ++ PM+D+ E A++ VS R+PP G RG +V RA+ +G + Y++ E L ++ QVES+ ++ + I V+G+D V +GP DLSAS+GY + GH +V+ ++ Sbjct: 10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGYPDNAGHPEVQRII 199 The following BLAST results are available for this feature:
BLAST of CX070272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070272 ID=CX070272; Name=CX070272; organism=Citrus sinensis; type=EST; length=845bpback to top |