CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC7 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain AH187) GN=ribBA PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.419e-68 Identity = 131/223 (58.74%), Postives = 165/223 (73.99%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 670 L + AK+ ++K+I+I DLI YRR + LV R +PT +G F A Y + LD EHIA+VKGDI G +LVRVHSECLTGD+FGS RCDCG QL A+ QIE G+GVL+Y+R EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K GL+GY L V RVPL P K+ENK YL+TK K+GH+ L Sbjct: 176 LLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDSKEHIALVKGDISTGDPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLEVIERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC1 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain ATCC 10987) GN=ribBA PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.419e-68 Identity = 131/223 (58.74%), Postives = 166/223 (74.44%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 670 L + AK+ ++K+I+I DLI YRR + LV R +PT +G F A Y + LD EHIA+VKGDI G+ +LVRVHSECLTGD+FGS RCDCG QL A+ QIE G+GVL+Y+R EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K GL+GY L V RVPL P K+ENK YL+TK K+GH+ L Sbjct: 176 LLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLEVIERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PELLD (Riboflavin biosynthesis protein ribBA OS=Pelodictyon luteolum (strain DSM 273) GN=ribBA PE=3 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 5.389e-68 Identity = 126/220 (57.27%), Postives = 165/220 (75.00%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L +F ++ LK+I+I DL+ YR +R+KLV+R+ +++PT +G F Y S +D H+A VKGD+ G+ +LVRVHS+C TGD F S RCDCG+QLA A++ IE GRGVLVYL EGRGIGL +KL+AYNLQD+G DTVEANE+LG D R+YGIGAQ+L+DLGVR M+L+TNNP K +GL+GYGL + R+PL + N+ YLETKR KMGH+ Sbjct: 182 LLKFKEKFGLKLITIKDLVAYRMQRNKLVERAVESKLPTAYGEFGLIAYESFIDHHNHMAFVKGDVSSGEPVLVRVHSQCATGDTFASLRCDCGNQLASALRMIEKEGRGVLVYLM-QEGRGIGLINKLKAYNLQDEGFDTVEANEQLGFKADLRDYGIGAQILQDLGVRKMRLLTNNPKKVIGLEGYGLEIVERLPLEIAPNEVNQFYLETKRDKMGHM 400
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCN (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ribBA PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.675e-67 Identity = 126/223 (56.50%), Postives = 164/223 (73.54%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 670 L + AK+ ++K+I+I DLI YRR + V + +PT +G F A Y + LD EHIA++KGD+ + +LVRVHSECLTGD+FGS RCDCG QL A+ QIE GRGVL+Y+R EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K GL+GY L + RVPL P K+ENK YL+TK K+GH+ L Sbjct: 176 LIQVAKQFDIKMITIEDLIAYRRHHETFVTKEVEITLPTEFGTFHAIGYTNSLDQKEHIALIKGDVSTDEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALTQIEREGRGVLLYMR-QEGRGIGLLNKLRAYKLQEEGLDTVEANEKLGFPADLRDYGIGAQILKDLGLQKLRLLTNNPRKIAGLQGYELEIVERVPLQMPTKQENKTYLQTKVTKLGHLLNL 397
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PROVI (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ribBA PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.959e-67 Identity = 129/220 (58.64%), Postives = 157/220 (71.36%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L ++ LK+I+I DL+ ++ +R KLV R+ + IPT +G F Y S D H+A VKGD+ + +LVRVHS+C TGD F S RCDCG+QLA A++ IE GRGVLVYL EGRGIGL +KL+AYNLQDDG DTVEANEELG D R+YGIGAQ+L+DLGVR M+LMTNNP K VGL+GYGL + RVPL NK YLETKR KMGH+ Sbjct: 182 LMTIKEKFGLKLITIKDLVAFQMRRSKLVQRAVESNIPTAYGEFRLMAYESFTDQQNHMAFVKGDVSTDEPVLVRVHSQCATGDTFASLRCDCGNQLASALRMIEKEGRGVLVYLM-QEGRGIGLINKLKAYNLQDDGFDTVEANEELGFKADLRDYGIGAQILQDLGVRKMRLMTNNPKKVVGLEGYGLEIVERVPLEIEPNAVNKTYLETKRDKMGHM 400
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACSU (Riboflavin biosynthesis protein ribBA OS=Bacillus subtilis GN=ribBA PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.959e-67 Identity = 131/221 (59.28%), Postives = 162/221 (73.30%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQD-ILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L E AK+ LK+I+I DLI+YR LV+R +PT +G F Y Y + +DG EH+A V GD+ G++ +LVRVHSECLTGD+FGS RCDCG QL A+ QI A GRGVL+YLR EGRGIGL +KL+AY LQ+ G DTVEANE LG D R YGIGAQ+LRDLGVR MKL+TNNP K GL+GYGL+++ RVPL K+ NK+YL+TK K+GH+ Sbjct: 176 LIEIAKKHQLKMITIKDLIQYRYNLTTLVEREVDITLPTDFGTFKVYGYTNEVDGKEHVAFVMGDVPFGEEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALNQIAAEGRGVLLYLR-QEGRGIGLINKLKAYKLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVRNMKLLTNNPRKIAGLEGYGLSISERVPLQMEAKEHNKKYLQTKMNKLGHL 395
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PELPB (Riboflavin biosynthesis protein ribBA OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ribBA PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.468e-65 Identity = 124/213 (58.22%), Postives = 156/213 (73.24%), Query Frame = 2 Query: 29 LKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 LK+I+I +L+ Y+ +R+KLV R+ +R+PT++G F Y S D H+A VKGD+ + +LVRVHS+C TGD F S RCDCG+QLA A+ IE GRGVL+YL EGRGIGL +KL+AYNLQD G DTVEANE+LG D R+YGIGAQ+L+DLGVR MKLMTNNP K VGL+GYGL + RVPL N+ YL+TKR K+GH+ G Sbjct: 191 LKLITIKELVAYQMQRNKLVQRAVESRLPTIYGEFRLIAYESFTDQHNHMAFVKGDVTTDEPVLVRVHSQCATGDTFASLRCDCGNQLASALTMIEKEGRGVLIYLM-QEGRGIGLINKLKAYNLQDQGYDTVEANEKLGFKADLRDYGIGAQILKDLGVRKMKLMTNNPKKVVGLEGYGLEIVERVPLEMASNPMNQFYLDTKRDKLGHMIG 402
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PROA2 (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=ribBA PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.513e-65 Identity = 127/228 (55.70%), Postives = 159/228 (69.74%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIE--HIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESN 679 L + ++ +LK+I+I DL+ Y+ KR KLV R+ +PT G F Y + D + H+A VKGD + +LVRVHS+C TGDIF S RCDCG+QLA AMQQIE AG+GVL+YL EGRGIGL +KL+AYNLQD G DTVEANE+LG D R+YGIGAQ+L+DLGV+ M+L+TNNP K VGL+GYGL + RVP+ N YLETKR KMGH+ N Sbjct: 182 LLKIKEKFDLKLITIKDLVAYQMKRKKLVARAVETSLPTRHGDFRLIAYEACCDSQQQNHLAFVKGDFSTDEPVLVRVHSQCATGDIFASLRCDCGNQLASAMQQIEKAGKGVLIYLM-QEGRGIGLINKLKAYNLQDQGFDTVEANEQLGFKADLRDYGIGAQILQDLGVKKMRLLTNNPKKIVGLEGYGLEIVERVPIEIAPNSVNLSYLETKRDKMGHMINCSCN 408
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNY3 (Riboflavin biosynthesis protein ribBA OS=Synechocystis sp. (strain PCC 6803) GN=ribBA PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.615e-64 Identity = 124/221 (56.11%), Postives = 157/221 (71.04%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGD--GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L E+A++ +LK+ISIADLI YR + D+ V R + P+ +G F Y YR++LD EHIA+VKGD + Q ++VR+HSECLTGD GS RCDC QL A++ +E G GV+VYLR EGRGIGL +KL+AY+LQD G DTVEANE LG P D R+YG+GAQML DLGV+ ++L+TNNP K GLKGYGL + RVPL+ N YL TK K+GH Sbjct: 179 LVEYARKYDLKLISIADLISYRLQHDRFVQRETICEFPSQFGEFKLYAYRNLLDQTEHIAIVKGDPSEFGQQPVMVRMHSECLTGDALGSLRCDCRMQLQAALKMLENHGLGVVVYLR-QEGRGIGLVNKLKAYSLQDLGYDTVEANERLGFPADLRDYGMGAQMLNDLGVKQIRLITNNPRKIAGLKGYGLEIVERVPLLIEANDYNSHYLTTKAEKLGH 398
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLMU (Riboflavin biosynthesis protein ribBA OS=Chlamydia muridarum GN=ribBA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.053e-64 Identity = 115/217 (53.00%), Postives = 158/217 (72.81%), Query Frame = 2 Query: 8 EFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 +FA++ +I++ DLI YR D LV+ S+ARIPT +G F + Y+SI+DG EH A+VKGDI + + + VRVHSECLTGD+ GS RCDCG QL +AM+ I G GV+VYLRG EGRGIG GHK++AY LQD G DTVEAN +L P+D+REYG+ AQ+L+DL + +++L+T+NP K+ L+ G+ + R+ L + EN+RYL TK+ +MGH Sbjct: 185 DFAEQHGFTVITVDDLITYRWTFDSLVEHVSSARIPTKYGEFFIHVYKSIIDGTEHFALVKGDIREQESVPVRVHSECLTGDVLGSCRCDCGAQLDMAMRYIAEQGLGVIVYLRGQEGRGIGFGHKIQAYALQDLGYDTVEANLQLSFPIDAREYGVAAQILKDLRLTSVRLITHNPKKFFELQRLGIHILDRIVLPVIVSSENERYLRTKKDRMGH 401 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |