CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTPL (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae GN=ribBA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.053e-64 Identity = 120/221 (54.30%), Postives = 155/221 (70.14%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 L++FA N+ I+I L YRRK D LV + S ++PT +G F A+ + ++ G EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE GRGV++YLR EGRGIGL +KLRAY LQD G DTVEAN LG D REY IGAQM + LGV++++L+TNNP+K GLK GL + R P+I K + YL+ K+ KMGH++ Sbjct: 180 LQKFAVEHNMPFITIQQLQEYRRKHDSLVKQISVVKMPTKYGEFMAHSFVEVISGKEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREPIIVEPNKNDIDYLKVKQIKMGHMF 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTPJ (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ribBA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.053e-64 Identity = 120/221 (54.30%), Postives = 155/221 (70.14%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 L++FA N+ I+I L YRRK D LV + S ++PT +G F A+ + ++ G EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE GRGV++YLR EGRGIGL +KLRAY LQD G DTVEAN LG D REY IGAQM + LGV++++L+TNNP+K GLK GL + R P+I K + YL+ K+ KMGH++ Sbjct: 180 LQKFAVEHNMPFITIQQLQEYRRKHDSLVKQISVVKMPTKYGEFMAHSFVEVISGKEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREPIIVEPNKNDIDYLKVKQIKMGHMF 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTP7 (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ribBA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.053e-64 Identity = 120/221 (54.30%), Postives = 155/221 (70.14%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 L++FA N+ I+I L YRRK D LV + S ++PT +G F A+ + ++ G EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE GRGV++YLR EGRGIGL +KLRAY LQD G DTVEAN LG D REY IGAQM + LGV++++L+TNNP+K GLK GL + R P+I K + YL+ K+ KMGH++ Sbjct: 180 LQKFAVEHNMPFITIQQLQEYRRKHDSLVKQISVVKMPTKYGEFMAHSFVEVISGKEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREPIIVEPNKNDIDYLKVKQIKMGHMF 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTP2 (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ribBA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.053e-64 Identity = 120/221 (54.30%), Postives = 155/221 (70.14%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 L++FA N+ I+I L YRRK D LV + S ++PT +G F A+ + ++ G EH+A+VKGD+ DG+ +L R+HSECLTGD FGS RCDCG Q A AM QIE GRGV++YLR EGRGIGL +KLRAY LQD G DTVEAN LG D REY IGAQM + LGV++++L+TNNP+K GLK GL + R P+I K + YL+ K+ KMGH++ Sbjct: 180 LQKFAVEHNMPFITIQQLQEYRRKHDSLVKQISVVKMPTKYGEFMAHSFVEVISGKEHVALVKGDLTDGEQVLARIHSECLTGDAFGSQRCDCGQQFAAAMTQIEQEGRGVILYLR-QEGRGIGLINKLRAYELQDKGMDTVEANVALGFKEDEREYYIGAQMFQQLGVKSIRLLTNNPAKIEGLKEQGLNIVAREPIIVEPNKNDIDYLKVKQIKMGHMF 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLTR (Riboflavin biosynthesis protein ribBA OS=Chlamydia trachomatis GN=ribBA PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.052e-63 Identity = 117/216 (54.17%), Postives = 159/216 (73.61%), Query Frame = 2 Query: 11 FAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 FA++ +L +I++ DLI YR D LV + S+AR+PT +G F+ + Y SI+DG +H A+VKGDI + + + VRVHSECLTGDI GS RCDCG QL +AM+ I G GV+VYLRG EGRGIG GHK+RAY LQD G DTV+AN +LG P+D+REYG+ AQ+L+DL + +++L+T+NP K+ L+ G+ V R+ L I EN+ YL TK+ +MGH Sbjct: 186 FAEQHDLTVITVDDLITYRYTYDSLVTKISSARLPTKYGDFSIHVYESIIDGTQHFALVKGDIHEQEAVPVRVHSECLTGDILGSCRCDCGAQLDMAMRYIAEEGLGVIVYLRGQEGRGIGFGHKIRAYALQDLGYDTVDANLQLGFPIDAREYGMAAQVLKDLQLTSVRLITHNPRKFFELQRLGIHVLDRIILPVSISTENEGYLRTKKERMGH 401
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACA2 (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens (strain FZB42) GN=ribBA PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.343e-63 Identity = 126/221 (57.01%), Postives = 157/221 (71.04%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIG-DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L E A+R LK+I+I DLI YR LV+R +PT +G F Y Y + +DG EH+A V GD+ + + +LVRVHSECLTGD+F S RCDCG QL A+ QI GRGVL+YLR EGRGIGL +KL+AY LQ+ G DTVEANE LG D R YGIGAQ+LRDLGV+ MKL+TNNP K GL+GYGL+++ RVPL + NK+YL+TK K+GH+ Sbjct: 176 LAEIAERHQLKMITIKDLIEYRYNITTLVNREVDITLPTDFGTFRVYGYTNEVDGKEHLAFVMGDVPFNSEPVLVRVHSECLTGDVFASHRCDCGPQLHAALAQIAEEGRGVLLYLR-QEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVQHMKLLTNNPRKIAGLEGYGLSISERVPLQMEASEHNKQYLQTKMKKLGHL 395
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAM (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens GN=ribBA PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 8.904e-63 Identity = 125/221 (56.56%), Postives = 156/221 (70.59%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIG-DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 + E AK LK+I+I DLI YR LV+R +PT +G F Y Y + +DG EH+A V GD+ + +LVRVHSECLTGD+F S RCDCG QL A++QI GRGVL+YLR EGRGIGL +KL+AY LQ+ G DTVEANE LG D R YGIGAQ+LRDLGV+ MKL+TNNP K GL+GYGL+++ RVPL + NK+YL+TK K+GH+ Sbjct: 176 ISEIAKSHQLKMITIKDLIEYRYNITTLVNREVDITLPTDFGTFRVYGYTNEVDGKEHLAFVMGDVPFNSGPVLVRVHSECLTGDVFASHRCDCGPQLHAALRQIAEEGRGVLLYLR-QEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVQHMKLLTNNPRKIAGLEGYGLSISDRVPLQMEASEHNKQYLQTKMKKLGHL 395
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACV8 (Riboflavin biosynthesis protein ribBA OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ribBA PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.844e-62 Identity = 118/219 (53.88%), Postives = 156/219 (71.23%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 LR+ A LK+ISI DLI YR K++ LV++ +PT +G F +R +G+EHIA++KGDI +G+ +LVRVHS C TGDIFGS RCDCG+QL A+Q IE G+G +VYL EGRGIGL K++AY LQ++G DTVEAN LG D R+YG+GAQ+LR +GV M+L+TNNP K VGL+ YGL++ VP+ K N+RYL+TK+ +MGH Sbjct: 181 LRKMADEWGLKLISIRDLIAYRLKQESLVEKGVEVDMPTEYGHFRLIPFRQKSNGLEHIAIIKGDIKEGEPVLVRVHSSCATGDIFGSMRCDCGEQLHKALQMIEKEGKGAVVYL-NQEGRGIGLMEKMKAYKLQENGVDTVEANILLGHQADERDYGVGAQILRSIGVTQMRLLTNNPVKRVGLESYGLSIVENVPIEITPNKYNERYLKTKKDRMGH 398
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFR (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis GN=ribBA PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 8.334e-61 Identity = 117/219 (53.42%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L E A+R LKIISI DLI YR + + +VDR +PT +G F +R +G+EHIA++KG + ILVRVHS C+TGDIFGS RC+CG+QL AM+ IEAAG+GV+VY+ EGRGIGL +K+ AY LQ++G DTV+AN LG D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL + V + N+RYL+TK+ +MGH Sbjct: 181 LVEVARRFGLKIISIKDLIAYRLQMESIVDRGVEVDMPTQFGHFRLIPFRQKSNGMEHIALIKGTWDTDEPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYM-NQEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKDRMGH 398
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACFN (Riboflavin biosynthesis protein ribBA OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ribBA PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 8.334e-61 Identity = 117/219 (53.42%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L E A+R LKIISI DLI YR + + +VDR +PT +G F +R +G+EHIA++KG + ILVRVHS C+TGDIFGS RC+CG+QL AM+ IEAAG+GV+VY+ EGRGIGL +K+ AY LQ++G DTV+AN LG D R+YG+GAQ+LR++GV+ MKLMTNNP K +GL+ YGL + V + N+RYL+TK+ +MGH Sbjct: 181 LVEVARRFGLKIISIKDLIAYRLQMESIVDRGVEVDMPTQFGHFRLIPFRQKSNGMEHIALIKGTWDTDEPILVRVHSSCMTGDIFGSCRCECGEQLHKAMEMIEAAGKGVIVYM-NQEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGAQILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKDRMGH 398 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |