CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_THEPX (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter sp. (strain X514) GN=ribBA PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.088e-60 Identity = 121/220 (55.00%), Postives = 158/220 (71.82%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L EFAK+ L+IISI DLI+YR K + LV R + A++PT +G F Y IL G +H+A++KGD+ + +LVR+HSECLTGDI GS RCDCGDQL AM++I G G+LVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K L YGL V RV + N++YL+TK+ KMGH+ Sbjct: 176 LLEFAKKFGLRIISIEDLIKYRMKNEILVRRVAQAKLPTKYGNFEIVGYEEILTGKQHVALIKGDVNK-EPVLVRIHSECLTGDILGSLRCDCGDQLHAAMERIGQEG-GILVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYNIAAQILKDIGVKKIRIMTNNPQKITELSDYGLDVVERVSIEICPNHYNEKYLKTKKEKMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_THEP3 (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ribBA PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.214e-60 Identity = 121/220 (55.00%), Postives = 158/220 (71.82%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L EFAK+ L+IISI DLI+YR K + LV R + A++PT +G F Y IL +H+A++KGDI + +LVR+HSECLTGDI GS RCDCGDQL AM++I G GVLVYLR EGRGIGL +K++AY+LQD G DTVEAN +LG P D REY I AQ+L+D+GV+ +++MTNNP K + L YGL V RV + N++YL+TK+ +MGH+ Sbjct: 176 LLEFAKKFGLRIISIEDLIKYRMKNEILVRRVAQAKLPTKYGNFEIVGYEEILTRKQHVALIKGDINK-EPVLVRIHSECLTGDILGSLRCDCGDQLHAAMERIGQEG-GVLVYLR-QEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYSIAAQILKDIGVKKIRIMTNNPQKIMELSDYGLDVVERVSIEICPNHYNEKYLKTKKERMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.203e-59 Identity = 111/222 (50.00%), Postives = 154/222 (69.37%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKG---DIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 LR F+ +LK+ISI LI +RR + V R+ ++PT +G FTA Y+ +DG EH+A++ G ++ +D+ VRVHSECLTGD+F S RCDCG QL +M+ I+ AG+G+++YLRGHEGRGIGL KL+AY+LQD G DTV+AN E GLP D+REY + Q+LRDLG+++ L+TNNP K GL+G+G+ + P+ +N YL TKR +M H Sbjct: 187 LRRFSDEHDLKMISIEQLIEWRRHNETQVRRTVETQLPTDFGSFTALGYKHEIDGQEHVALIAGGVEELNGAEDVFVRVHSECLTGDVFHSRRCDCGQQLHQSMEIIQEAGQGIIIYLRGHEGRGIGLLAKLKAYSLQDSGLDTVDANLEQGLPEDAREYSVAGQILRDLGIKSANLLTNNPHKGEGLRGFGVEASAHTPVEIEPNADNIDYLRTKRDRMNH 408
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_BACTN (Riboflavin biosynthesis protein ribBA OS=Bacteroides thetaiotaomicron GN=ribBA PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.330e-58 Identity = 116/219 (52.97%), Postives = 149/219 (68.04%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 LR A LK+ISI DLI YR K++ +V++ +PT G F +R +G+EH+A+ KG + + ILVRVHS C TGDI GS RCDCG+QL AM+ IE G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR+LGV MKL+TNNP K VGL+ YGL + VP+ T N+RYL TK+ +MGH Sbjct: 181 LRAMADEHGLKLISIHDLIAYRLKQESIVEKGVEVNMPTEHGMFRLIPFRQKSNGLEHMAIFKGTWNEDEPILVRVHSSCATGDILGSHRCDCGEQLHKAMEMIEKEGKGVVVYLN-QEGRGIGLMEKMKAYKLQEDGMDTVDANLCLGHLADERDYGVGAQILRELGVHKMKLLTNNPVKRVGLEAYGLEIVENVPVETVPNPYNERYLRTKKERMGH 398
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_CYTH3 (Riboflavin biosynthesis protein ribBA OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ribBA PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.738e-58 Identity = 113/219 (51.60%), Postives = 146/219 (66.67%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L++ A + NLK+ISI DLI YR + LV R +PT G F +R I G H+A++KG + ++VRVHS C+TGDIFGS RCDCG QL AM+ I+ G+GV++Y+ EGRGIGL +KL+AY LQ+ GRDTVEAN ELG +D R+YG GAQ+LRDL + ++L+TNNP K L GYGL + VP+ P N YL+TKR KMGH Sbjct: 182 LKQIATKFNLKLISIKDLIEYRLTHESLVKREIGVDMPTNLGDFDLIAFRQISTGEVHLALIKGTWEKDEPVMVRVHSSCVTGDIFGSCRCDCGPQLHKAMEMIQQEGKGVILYMN-QEGRGIGLLNKLKAYKLQEQGRDTVEANLELGFKMDQRDYGTGAQILRDLNISKLRLITNNPVKRAALAGYGLEITEAVPIEIPSNPHNLEYLKTKRDKMGH 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_UNCTG (Riboflavin biosynthesis protein ribBA OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=ribBA PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.871e-58 Identity = 110/220 (50.00%), Postives = 153/220 (69.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L +FAK+ +L II+I +L+ YRR+ +K + +PT +G F + ++ HIA+VKG + + Q++LVRVHS C TGDIF S RCDCGDQL A++ + A +GV++Y+ EGRGIGL +KL+AY LQ+ G DTVEAN+ LG D R+YGIGAQML +LG++++ LMTNNP K GL+ YGL + RVPL K N++YL+TK+ KMGH+ Sbjct: 181 LIKFAKKHDLHIITIGELVNYRRRTEKFISEIVNVDLPTRYGDFKLVLFEDLITKDSHIAVVKGVVKNRQNVLVRVHSSCETGDIFHSLRCDCGDQLETALKAVGEAEQGVVLYIH-QEGRGIGLANKLKAYRLQEKGMDTVEANKALGFDPDLRDYGIGAQMLSELGIKSINLMTNNPGKINGLESYGLKITKRVPLEISPSKSNEKYLKTKKEKMGHM 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PORGI (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis GN=ribBA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.471e-57 Identity = 111/219 (50.68%), Postives = 151/219 (68.95%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L E +KR LKII+I DLI YR K++ +V++ +PT +G F +R +G+EHIA+ KG + + ILVR+HS C TGDIFGS RCDCG QL AM++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL T + N+ YL TK+ +MGH Sbjct: 182 LWEVSKRFGLKIIAIKDLIAYRLKQESIVEKGVEVDMPTEYGHFRLIPFRQKSNGLEHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYL-NQEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFYLRTKKERMGH 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PORG3 (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ribBA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.471e-57 Identity = 111/219 (50.68%), Postives = 151/219 (68.95%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 658 L E +KR LKII+I DLI YR K++ +V++ +PT +G F +R +G+EHIA+ KG + + ILVR+HS C TGDIFGS RCDCG QL AM++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL T + N+ YL TK+ +MGH Sbjct: 182 LWEVSKRFGLKIIAIKDLIAYRLKQESIVEKGVEVDMPTEYGHFRLIPFRQKSNGLEHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYL-NQEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFYLRTKKERMGH 399
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_BURMA (GTP cyclohydrolase-2 OS=Burkholderia mallei GN=ribA PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.509e-57 Identity = 104/189 (55.03%), Postives = 140/189 (74.07%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 + A +PT +G FT+Y +R EH+A+V GD+ + +L R+HSECLTGD+FGS RCDCG+QL L+++ I A GRGVL+YLRGHEGRGIGL +K+RAY LQ+ GRDTVEAN +LGLP D+REY A +LR L V +++LM+NNP K+ L +G+ V RV L P+++EN+RY+ TK+ K GH Y Sbjct: 5 ATATLPTRYGTFTSYAFRVAGGDAEHLALVMGDVAEQPSVLTRLHSECLTGDVFGSYRCDCGEQLDLSLRYIAAEGRGVLLYLRGHEGRGIGLSNKIRAYALQEQGRDTVEANLDLGLPDDAREYDSAAAILRILKVTSVRLMSNNPKKFDTLARHGIPVCERVALAVPVREENERYIRTKQLKFGHYY 193
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.277e-57 Identity = 111/220 (50.45%), Postives = 151/220 (68.64%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L E AK+ ++KII I DLI YR + + +V+ +PT +G F +R +G+EHIA++KG + ILVRVHS C TGDIFGS RC+CG+QL AM++I+ G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR +GV M+LM+NNP K VGL+ YGL V VP+ N+ Y++TK+ +MGH+ Sbjct: 182 LIEVAKKFDIKIICIKDLIAYRLRTESIVENGVEVDLPTEYGHFRLIPFRQKSNGLEHIALIKGKFEKDEPILVRVHSSCATGDIFGSMRCECGEQLHEAMRRIDQEGKGVIVYLN-QEGRGIGLMEKMKAYKLQEDGLDTVDANLHLGHQADERDYGVGAQILRHIGVTKMRLMSNNPVKRVGLEAYGLEVVENVPIEVKPNPYNEFYMKTKKERMGHV 400 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |