CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPG (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain GB-1) GN=ribA PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.285e-49 Identity = 101/195 (51.79%), Postives = 126/195 (64.62%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNG 682 +A+++PT + FT + + G EH+ + GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQG 200
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPW (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain W619) GN=ribA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.603e-49 Identity = 101/197 (51.27%), Postives = 127/197 (64.47%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 688 +A+++PT + FT + + G EH+ + GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G E G + Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIKVAERVPLHTGHNPHNRYYLATKADKLGHMLGNEHQGEV 202
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEA7 (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa (strain PA7) GN=ribA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.603e-49 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL + K N+RYL TK K+GH+ G Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALTMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAVTVAERVPLQKGLNKHNRRYLATKAGKLGHMLG 195
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEAE (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa GN=ribA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL + K N+RYL TK K+GH+ G Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALSMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAITVAERVPLQKGLNKHNRRYLATKAGKLGHMLG 195
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEAB (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ribA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL + K N+RYL TK K+GH+ G Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALSMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAITVAERVPLQRGLNKHNRRYLATKAGKLGHMLG 195
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEA8 (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa (strain LESB58) GN=ribA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYG 667 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL + K N+RYL TK K+GH+ G Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALSMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAITVAERVPLQKGLNKHNRRYLATKAGKLGHMLG 195
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEFS (GTP cyclohydrolase-2 OS=Pseudomonas fluorescens (strain SBW25) GN=ribA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.557e-49 Identity = 103/197 (52.28%), Postives = 125/197 (63.45%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 688 +A+++PT + FT + G EH+ + GDI DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV +++LMTNNP K L G+ VA RVPL T NK YL TK +K+ H+ G E G + Sbjct: 7 AASKLPTPFATFTMNGFLEEATGREHVVLSLGDIADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIAREGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVSSLRLMTNNPRKVKALTEMGITVAERVPLHTGHNPHNKLYLATKASKLDHMMGNEHQGEV 202
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSESM (GTP cyclohydrolase-2 OS=Pseudomonas syringae pv. tomato GN=ribA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.630e-48 Identity = 100/192 (52.08%), Postives = 125/192 (65.10%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLE 673 +A+++PT + F + + G EH+ + GD+ DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML+ LGV++++LMTNNP K L G+ VA RVPL T N+ YL TK K+GH+ G E Sbjct: 7 AASKLPTPFAEFAMHGFIESATGREHVVLSLGDVADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIATEGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLQHLGVQSLRLMTNNPRKVKALTDMGINVAERVPLHTGQNPHNRLYLATKAGKLGHMMGNE 197
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_PSEE4 (GTP cyclohydrolase-2 OS=Pseudomonas entomophila (strain L48) GN=ribA PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48 Identity = 99/197 (50.25%), Postives = 127/197 (64.47%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 688 +A+++PT + FT + + G EH+ + GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL T N+ YL TK K+GH+ G + G + Sbjct: 7 AASKLPTPFAIFTMHGFLDEATGREHVVLSLGDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMSIKVAERVPLHTGHNPHNRLYLATKADKLGHMMGNKHQGEV 202
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_HAHCH (GTP cyclohydrolase-2 OS=Hahella chejuensis (strain KCTC 2396) GN=ribA PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.015e-47 Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 ++ ++PT +G F + ++ + EHIA+ GDIGDG +L R HSECLTGD S RCDCG QL A++ I A GRG+L+YLR EGRGIGL +K+RAYNLQD G DTVEANE+LG D R+Y + ML LG+ ++LMTNNP K L G+ V RVPL N+ YL TK K+GH+ Sbjct: 7 ASCKLPTPFGVFDMHGFQEVGTQKEHIALTLGDIGDGASVLARTHSECLTGDALFSMRCDCGYQLDEALRSIAAEGRGILLYLR-QEGRGIGLLNKIRAYNLQDQGADTVEANEQLGFAADMRDYSMCKPMLYHLGISRIRLMTNNPRKVDSLTKLGIEVVERVPLEVGRNPHNRNYLATKAGKLGHL 193 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |