CX070216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_AERHH (GTP cyclohydrolase-2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ribA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.526e-46 Identity = 95/187 (50.80%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 104 ARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIY 664 +++PT WG FT ++ G +H A+V GDI + +L R+HSECLTGD S RCDCG QL A++ I AGRGVL+Y+R EGRGIGL +K+RAY+LQD G DTVEAN LG D R+Y I A ML+ L V+++KLMTNNP K ++ +G+ VA RVPL N+ YL TK K+ H++ Sbjct: 10 SKLPTPWGTFTLVGFQETGTGKDHAALVMGDITGDEPVLGRIHSECLTGDALFSLRCDCGFQLQAALENIAKAGRGVLLYVR-QEGRGIGLLNKIRAYHLQDQGADTVEANVALGFAADMRDYTICADMLKQLEVKSLKLMTNNPRKMKAMESFGIPVAERVPLQEGRNPHNEFYLSTKANKLDHMF 195
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_ENTS8 (GTP cyclohydrolase-2 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ribA PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.573e-46 Identity = 95/190 (50.00%), Postives = 123/190 (64.74%), Query Frame = 2 Query: 92 RSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 R + A++PT WG F + + G +H+A+V GDI + +L RVHSECLTGD S RCDCG QL A+ I AGRGVL+Y R EGR IGL +K+RAY LQD G DTVEAN +LG D R++ + A M + LGV ++L+TNNP K L G+ + RVPLI +N+ YL+TK AKMGH+ Sbjct: 5 RVAEAKLPTPWGDFLMVGFEELATGQDHVALVFGDISGTEPVLARVHSECLTGDALFSLRCDCGFQLEAALSHIAEAGRGVLLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPRKVEILTEAGINIVERVPLIVGRNPKNEHYLDTKAAKMGHL 193
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAW (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MW2) GN=ribBA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46 Identity = 98/220 (44.55%), Postives = 142/220 (64.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ +I P N Y+ETK+ KMGH+ Sbjct: 177 LQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAS (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MSSA476) GN=ribBA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46 Identity = 98/220 (44.55%), Postives = 142/220 (64.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ +I P N Y+ETK+ KMGH+ Sbjct: 177 LQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAR (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MRSA252) GN=ribBA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46 Identity = 98/220 (44.55%), Postives = 142/220 (64.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ +I P N Y+ETK+ KMGH+ Sbjct: 177 LQKFKEKHKLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAC (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain COL) GN=ribBA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46 Identity = 98/220 (44.55%), Postives = 142/220 (64.55%), Query Frame = 2 Query: 2 LREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ +I P N Y+ETK+ KMGH+ Sbjct: 177 LQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL 392
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_SHELP (GTP cyclohydrolase-2 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ribA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.292e-45 Identity = 93/188 (49.47%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 + +++PT WG F + + G EH+A+ G++ Q IL R+HSECLTGD S RCDCG QL AMQ I AG+G ++YLR EGRGIGL +K+RAY LQD G +TVEANE LG D R+Y + ML +GV+ +KLMTNNP K +K G+AV RVPL + N+ YL+TK ++GH+ Sbjct: 7 ATSKLPTPWGVFAMHGFEDTETGKEHVALTFGELDASQPILGRIHSECLTGDALFSLRCDCGFQLQTAMQNIAEAGQGFILYLR-QEGRGIGLLNKIRAYELQDQGANTVEANERLGFAADMRKYDMIKPMLEKIGVQQVKLMTNNPRKVKAMKELGIAVIERVPLQVGKNRYNEAYLKTKSTELGHM 193
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_SHEAM (GTP cyclohydrolase-2 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ribA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.292e-45 Identity = 94/192 (48.96%), Postives = 123/192 (64.06%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLE 673 + +++PT WG F + + G EH+A+ GD+ +L R+HSECLTGD S RCDCG QL AMQ+I GRG ++YLR EGRGIGL +K+RAY LQD G +TVEANE+LG D R+Y + A ML LG+ +KLMTNNP K +K G+ V RVPL + N+ YL+TK K+GH+ E Sbjct: 7 ATSKLPTPWGVFAMHGFEDSETGKEHVALTFGDLSGDAPVLGRIHSECLTGDALFSLRCDCGFQLQTAMQRIAETGRGFILYLR-QEGRGIGLLNKIRAYELQDKGANTVEANEQLGFAADMRKYDMIAPMLAHLGISRVKLMTNNPRKVNAMKDVGMDVVERVPLQVGKNRYNEAYLKTKSDKLGHMMSEE 197
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_TOLAT (GTP cyclohydrolase-2 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ribA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.203e-45 Identity = 95/188 (50.53%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 98 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 ++A +PT WG FT ++ G +H+A+ GDI +L R+HSECLTGD S RCDCG QL A+Q+I RGVL+Y+R EGRGIGL +K+ AY+LQD G DTVEANE LG D R+Y I A ML+ L V++++LMTNNP K ++ YG+ VA RVPL N+ YL TK K+GH+ Sbjct: 8 ASAELPTPWGVFTMTGFKEEATGKDHVALSMGDITTDAPVLARIHSECLTGDALFSLRCDCGFQLQAALQRIAKEERGVLLYVR-QEGRGIGLLNKIHAYHLQDQGADTVEANEALGFAPDLRDYTICADMLKLLDVKSLRLMTNNPRKIKAMEKYGIPVAERVPLEEGKNAYNEFYLATKAGKLGHM 194
BLAST of CX070216 vs. ExPASy Swiss-Prot
Match: RIBA_TERTT (GTP cyclohydrolase-2 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=ribA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.203e-45 Identity = 91/192 (47.40%), Postives = 120/192 (62.50%), Query Frame = 2 Query: 86 VDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 661 ++ ++++PT WG F + + EH+ + GD+ + +LVR+HSECLTGD S RCDCG QL AM +I GRG + YLR EGRGIGL +K+RAY+LQD G DTVEANE LG D R+Y + M +G+ +KLMTNNP K L G G+ +A R+P T N YLETKR K+GH+ Sbjct: 3 IEYVESSKLPTAWGMFEMHGFTDSETDKEHLVLSMGDLAGDEPVLVRIHSECLTGDALFSLRCDCGAQLQAAMHRISIEGRGAIFYLR-QEGRGIGLVNKIRAYHLQDKGADTVEANEALGFGADMRDYSMLKPMFEKMGISRVKLMTNNPRKIDALIGLGIDIAERLPHETGRNPHNSHYLETKRGKLGHL 193 The following BLAST results are available for this feature:
BLAST of CX070216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070216 ID=CX070216; Name=CX070216; organism=Citrus sinensis; type=EST; length=790bpback to top |