CX070166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_ECOL6 (Nitrogen regulatory protein P-II 1 OS=Escherichia coli O6 GN=glnB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 K++AI++P+++ V AL +GI G+TV++V+GFG Q G TE + G+E+ D F+ KVK+EIVV D V+ +D I+ A+TG+IGDGKIF+ V+ VIR+RTGE + A Sbjct: 3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_ECO57 (Nitrogen regulatory protein P-II 1 OS=Escherichia coli O157:H7 GN=glnB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 K++AI++P+++ V AL +GI G+TV++V+GFG Q G TE + G+E+ D F+ KVK+EIVV D V+ +D I+ A+TG+IGDGKIF+ V+ VIR+RTGE + A Sbjct: 3 KIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVD-FLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_RHORT (Nitrogen regulatory protein P-II OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glnB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23 Identity = 51/110 (46.36%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 K+EAI++P+++ +V AL +G++G+TV++ +GFG Q G TE + G+E+ D F+ KVK+E+V+ VE I+ I + A+TG IGDGKIF+ + + IR+RTGERG A Sbjct: 3 KIEAIIKPFKLDEVKEALHEIGLQGITVTEAKGFGRQKGHTELYRGAEYVVD-FLPKVKIELVIEDALVERAIEAIQQAAQTGRIGDGKIFVYAIEEAIRIRTGERGGDA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_MYCTU (Nitrogen regulatory protein P-II OS=Mycobacterium tuberculosis GN=glnB PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 51/109 (46.79%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 207 VEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 + AI++P+ + V ++L + G+ G+TVS+++G+G Q G TE + G+E+S D FV KV++E+VV V+ V+D I+ ARTG+IGDGK+++ PV ++RVRTGERG A Sbjct: 4 ITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVD-FVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_MYCBO (Nitrogen regulatory protein P-II OS=Mycobacterium bovis GN=glnB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 51/109 (46.79%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 207 VEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 + AI++P+ + V ++L + G+ G+TVS+++G+G Q G TE + G+E+S D FV KV++E+VV V+ V+D I+ ARTG+IGDGK+++ PV ++RVRTGERG A Sbjct: 4 ITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVD-FVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_BRAJA (Nitrogen regulatory protein P-II OS=Bradyrhizobium japonicum GN=glnB PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 51/107 (47.66%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERG 524 K+EAI++P+++ +V AL +G++G+TV++ +GFG Q G E + G+E+ D F+ KVK+EIV+ D VE ID I A+TG IGDGKIF+ + + IR+RTGE G Sbjct: 3 KIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHAELYRGAEYIVD-FLPKVKIEIVIGDDLVERAIDAIRRAAQTGRIGDGKIFVSNIEEAIRIRTGESG 108
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_HAEIN (Nitrogen regulatory protein P-II OS=Haemophilus influenzae GN=glnB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 52/110 (47.27%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 K+EA+++P+++ V +L ++GI G+T+++VRGFG Q G TE + G+E+ D F+ KVK+E+VV + V+ I+ I+E A+TG+IGDGKIF+ V IR+RTGE E A Sbjct: 3 KIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVD-FLPKVKLEVVVPDELVDQCIEAIIETAQTGKIGDGKIFVYHVERAIRIRTGEENEDA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNB_RHOCA (Nitrogen regulatory protein P-II OS=Rhodobacter capsulatus GN=glnB PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21 Identity = 52/110 (47.27%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 204 KVEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 KVEAI++P+++ +V AL GI+G++V +V+GFG Q G TE + G+E+ D F+ KVK+E+V+ + V+ I+ I+ ART +IGDGKIF+ + IR+RTGE GE A Sbjct: 3 KVEAIIKPFKLDEVKEALQEAGIQGLSVIEVKGFGRQKGHTELYRGAEYVVD-FLPKVKIEMVLPDEMVDIAIEAIVGAARTEKIGDGKIFVSSIEQAIRIRTGETGEDA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNK_SHIFL (Nitrogen regulatory protein P-II 2 OS=Shigella flexneri GN=glnK PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 49/109 (44.95%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 207 VEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 V I++P++++ V AL ++GI+G+TV++V+GFG Q G E + G+E+S + F+ KVK+++ ++ DQ++ VID + + A TG+IGDGKIF+ + VIR+RTGE E A Sbjct: 4 VTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVN-FLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAA 111
BLAST of CX070166 vs. ExPASy Swiss-Prot
Match: GLNK_ECOLI (Nitrogen regulatory protein P-II 2 OS=Escherichia coli (strain K12) GN=glnK PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 49/109 (44.95%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 207 VEAILRPWRVQQVSSALLNMGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVSKDQVEGVIDKIMEEARTGEIGDGKIFLVPVSDVIRVRTGERGEKA 533 V I++P++++ V AL ++GI+G+TV++V+GFG Q G E + G+E+S + F+ KVK+++ ++ DQ++ VID + + A TG+IGDGKIF+ + VIR+RTGE E A Sbjct: 4 VTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVN-FLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAA 111 The following BLAST results are available for this feature:
BLAST of CX070166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070166 ID=CX070166; Name=CX070166; organism=Citrus sinensis; type=EST; length=728bpback to top |