CX070157

Overview
NameCX070157
Unique NameCX070157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 5.858e-92
Identity = 160/208 (76.92%), Postives = 186/208 (89.42%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P RPSD PLRLPLQDVYKIGGIGTVPVGRVETG +K GMVV F P+ +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+A+FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFSEL+ KIDRRSGK++E  PKF+K+GD+ +VKM+P+KPM VE ++DYPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  236 PVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVD 443          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.651e-92
Identity = 162/208 (77.88%), Postives = 185/208 (88.94%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            PKRP D PLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTF PSGL+TEVKSVEMHHEAL +A PGDNVGFNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSVEKK+
Sbjct:  230 PKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGLIKPGMVVTFAPSGLSTEVKSVEMHHEALPQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDTPKMIKSGDAAMVKMVASKPMCVEAFTQYPPLGRFAVRDMRQTVAVGVIKSVEKKE 437          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 9.992e-92
Identity = 159/208 (76.44%), Postives = 188/208 (90.38%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P RPSD PLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNV+VKD++RG VAS+SK+DPA+EAA+F +QVI++NHPGQIG GYAPVLDCHT+HIA KF+EL+ KIDRR+GK LE  PKF+K+GDA +VK++P+KPM VE++++YPPLGRFAVRDMRQTVAVG+IKSV+K D
Sbjct:  236 PVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSLEASPKFVKSGDACIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGIIKSVDKTD 443          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A3_HUMAN (Putative elongation factor 1-alpha-like 3 OS=Homo sapiens GN=EEF1AL3 PE=5 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 9.992e-92
Identity = 165/207 (79.71%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGF VKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCH +HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFKVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHMAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.305e-91
Identity = 160/206 (77.67%), Postives = 184/206 (89.32%), Query Frame = -2
Query:  209 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 826
            PKRP+D PLRLPLQDVYKIGGIGTVPVGR+ETGVLKPGMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+FT+QVI+MNHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK  E  PKF+K+GD+ +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK
Sbjct:  237 PKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGQPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFTAQVIVMNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKATESAPKFIKSGDSAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVEK 442          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_OSCTI (Elongation factor 1-alpha 2 OS=Oscheius tipulae GN=eft-2 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.305e-91
Identity = 159/208 (76.44%), Postives = 186/208 (89.42%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P+RP+D PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHE+L EA PGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  238 PQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDPPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.704e-91
Identity = 162/207 (78.26%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.704e-91
Identity = 162/207 (78.26%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.704e-91
Identity = 162/207 (78.26%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.226e-91
Identity = 160/208 (76.92%), Postives = 184/208 (88.46%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P+RP+D PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHE+L EA PGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+ NFT+QVI+MNHPGQI  GY PVLDCHT+HIA KF+EL  K+DRR+GK  E  PKFLK+GDAG+V++IPTKP  VE+F+DY PLGRFAVRDMRQTVAVGVIKSV K D
Sbjct:  239 PQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVTTEVKSVEMHHESLPEASPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKNFTAQVIVMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRTGKSTEASPKFLKSGDAGIVELIPTKPPCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVTKDD 446          
The following BLAST results are available for this feature:
BLAST of CX070157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A1_RHIRA5.858e-9276.92Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_PORYE7.651e-9277.88Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_SCHCO9.992e-9276.44Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A3_HUMAN9.992e-9279.71Putative elongation factor 1-alpha-like 3 OS=Homo ... [more]
EF1A_TRIRE1.305e-9177.67Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A2_OSCTI1.305e-9176.44Elongation factor 1-alpha 2 OS=Oscheius tipulae GN... [more]
EF1A2_RABIT1.704e-9178.26Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_HUMAN1.704e-9178.26Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN1.704e-9178.26Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A3_OSCTI2.226e-9176.92Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15B04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15B04-D7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070157 ID=CX070157; Name=CX070157; organism=Citrus sinensis; type=EST; length=833bp
TTTTTTTTTTTTTTTTTACCACCAATAACGCAATGATATAAAACCAAATT
CAGAGAATTAAAATGAAGTCTACCGTAAAACAAACTAAAACATGACAAAA
ATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCCAAA
AAACTCCTCACTTCTTCTTGGCAGCAGACTTGGTGACCTTGGCACCCGAT
GGATCCTTCTTTTCAACACTCTTGATCACACCAACAGCTACAGTCTGACG
CATGTCCCTAACAGCAAAACGACCAAGGGGTGGGTAGTCGGAGAAGGTCT
CAACAACCATGGGCTTGGTGGGAATCATCTTAACCATTCCGGCATCTCCA
TTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTGTC
AATCTTGGTCACAAGCTCAGAAAACTTGACAGCAATGTGGGAGGTGTGGC
AGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCAGGATGGTTCATG
ATGATGACCTGTGAAGTGAAGTTGGCAGCTTCCCTGGCCGGATCATCCTT
CGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCT
TCACGTTGAAGCCAACATTGTCACCCGGAAGGGCCTCCTGCAGAGCTTCG
TGGTGCATCTCAACAGACTTAACCTCAGTTGTCAATCCAGAGGGACCAAA
TGTCACCACCATACCAGGCTTGAGCACACCGGTCTCAACGCGACCCACTG
GGACGGTTCCAATGCCACCAATCTTGTACACGTCCTGGAGTGGCAGACGA
AGGGGGTTGTCTGAGGGCCTCTTCGGCTCATTG
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