CX070157

Overview
NameCX070157
Unique NameCX070157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.226e-91
Identity = 159/208 (76.44%), Postives = 186/208 (89.42%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P+RP+D PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHE+L EA PGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  238 PQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.907e-91
Identity = 157/206 (76.21%), Postives = 185/206 (89.81%), Query Frame = -2
Query:  209 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 826
            PKRP+D PLRLPLQDVYKIGGIGTVPVGR+ETG+LKPGMVVTF PS +TTEVKSVEMHHE L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E+ PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  237 PKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLQKIDRRTGKAVEESPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.907e-91
Identity = 160/208 (76.92%), Postives = 184/208 (88.46%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P RPSD PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P+G+TTEVKSVEMHHE L E LPGDNVGFNVKNV+VK+++RG VA +SK+DP +   +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F EL+ KIDRRSGK++E  PKF+K GDA +V+MIP+KPM VETF++YPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  236 PTRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.907e-91
Identity = 162/207 (78.26%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.907e-91
Identity = 162/207 (78.26%), Postives = 183/207 (88.41%), Query Frame = -2
Query:  206 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  238 PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 4.959e-91
Identity = 157/206 (76.21%), Postives = 185/206 (89.81%), Query Frame = -2
Query:  209 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 826
            PKRP+D PLRLPLQDVYKIGGIGTVPVGR+ETG+LKPGMVVTF PS +TTEVKSVEMHHE L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E+ PKF+K+GDA +VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  237 PKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMVVTFAPSNVTTEVKSVEMHHEQLSEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A4_OSCTI (Elongation factor 1-alpha 4 OS=Oscheius tipulae GN=eft-4 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.105e-90
Identity = 158/208 (75.96%), Postives = 185/208 (88.94%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P+RP+D PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHE+L EA PGDNVGFN KNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  238 PQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAQPGDNVGFNEKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.461e-90
Identity = 157/208 (75.48%), Postives = 182/208 (87.50%), Query Frame = -2
Query:  203 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 826
            P RP+D PLRLPLQDVYKIGGIGTVPVGRVETG +K GMVVTF P+G+TTEVKSVEMHHE L E LPGDNVGFNVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSELV KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSV K D
Sbjct:  235 PSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKGGMVVTFAPAGVTTEVKSVEMHHEQLSEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELVEKIDRRTGKSVEAAPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVAKSD 442          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.214e-90
Identity = 154/210 (73.33%), Postives = 185/210 (88.10%), Query Frame = -2
Query:  203 NEPKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 832
            ++PKRP D PLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMV+TF P  +TTE KSVEMHHE+L EA PGDNVGF VKN++VKDL+RG+VAS+SK+DPA++  NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF E+ +K+DRRSGK LE+EPKF+K+G+A +V+M+P KPM VE F+ YPPLGRFAVRDM+QTVAVGVIK V KK+
Sbjct:  224 DQPKRPKDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVLTFAPMNITTECKSVEMHHESLTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKKE 433          
BLAST of CX070157 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 5.483e-90
Identity = 152/209 (72.73%), Postives = 186/209 (89.00%), Query Frame = -2
Query:  200 PKRPSDNPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 826
            P RP++ PLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF P+ +TTEVKSVEMHHE+L++A PGDNVGFNVKNV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIKSV  KDP
Sbjct:  238 PSRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMIVTFAPANITTEVKSVEMHHESLEQASPGDNVGFNVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIKSVNFKDP 446          
The following BLAST results are available for this feature:
BLAST of CX070157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A1_OSCTI2.226e-9176.44Elongation factor 1-alpha 1 OS=Oscheius tipulae GN... [more]
EF1A_PODAN2.907e-9176.21Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A_ARXAD2.907e-9176.92Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A2_RAT2.907e-9178.26Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_MOUSE2.907e-9178.26Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A_PODCU4.959e-9176.21Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A4_OSCTI1.105e-9075.96Elongation factor 1-alpha 4 OS=Oscheius tipulae GN... [more]
EF1A_AURPU2.461e-9075.48Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A_STYLE3.214e-9073.33Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_ARTSA5.483e-9072.73Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15B04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15B04-D7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070157 ID=CX070157; Name=CX070157; organism=Citrus sinensis; type=EST; length=833bp
TTTTTTTTTTTTTTTTTACCACCAATAACGCAATGATATAAAACCAAATT
CAGAGAATTAAAATGAAGTCTACCGTAAAACAAACTAAAACATGACAAAA
ATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCCAAA
AAACTCCTCACTTCTTCTTGGCAGCAGACTTGGTGACCTTGGCACCCGAT
GGATCCTTCTTTTCAACACTCTTGATCACACCAACAGCTACAGTCTGACG
CATGTCCCTAACAGCAAAACGACCAAGGGGTGGGTAGTCGGAGAAGGTCT
CAACAACCATGGGCTTGGTGGGAATCATCTTAACCATTCCGGCATCTCCA
TTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTGTC
AATCTTGGTCACAAGCTCAGAAAACTTGACAGCAATGTGGGAGGTGTGGC
AGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCAGGATGGTTCATG
ATGATGACCTGTGAAGTGAAGTTGGCAGCTTCCCTGGCCGGATCATCCTT
CGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCT
TCACGTTGAAGCCAACATTGTCACCCGGAAGGGCCTCCTGCAGAGCTTCG
TGGTGCATCTCAACAGACTTAACCTCAGTTGTCAATCCAGAGGGACCAAA
TGTCACCACCATACCAGGCTTGAGCACACCGGTCTCAACGCGACCCACTG
GGACGGTTCCAATGCCACCAATCTTGTACACGTCCTGGAGTGGCAGACGA
AGGGGGTTGTCTGAGGGCCTCTTCGGCTCATTG
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