CX070123

Overview
NameCX070123
Unique NameCX070123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.595e-19
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = -1
Query:  258 CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 719
            C   CG +G+    N+CS CYK  +L+   A                                   EP+    Q  C    S +VE +P +   RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+    P+I+A+KL +
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPAL--------------------------------RFEPETEQSQ-CCPPTNSPAVEEEPVK-KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.746e-18
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = -1
Query:  255 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 440
            +RC+ C+KRVGLTGF+CRCG L+C  HR+S+ H C FDY+TA R+ I +ANPVI+A K+ KI
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = -1
Query:  264 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 488
            AS  S S     +   +RC++C+++VGLTGFKCRCG  +C  HRY+D+H C FDY+++ R+ I K NPV+ A+KL
Sbjct:  159 ASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: ZFAN3_RAT (AN1-type zinc finger protein 3 OS=Rattus norvegicus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = -1
Query:  258 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 740
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSEEECGPCTDTAHVSLITPTKRSCGADSQSESEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: ZFAN3_MOUSE (AN1-type zinc finger protein 3 OS=Mus musculus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = -1
Query:  258 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 740
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSTEECGPCTDTAHVSLITPTKRSCGADSQSENEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = -1
Query:  255 KEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 452
            K+  + C  C K+ GL + ++CRCGN +C SHRY++ H C +DY++A R  + +ANPV+ A KL KI
Sbjct:  661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: ZFAN3_HUMAN (AN1-type zinc finger protein 3 OS=Homo sapiens GN=ZFAND3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 54/210 (25.71%), Postives = 83/210 (39.52%), Query Frame = -1
Query:  258 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 740
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S       ET+S N + S+   T+      +  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGTDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CX070123 vs. ExPASy Swiss-Prot
Match: ZFAN3_XENLA (AN1-type zinc finger protein 3 homolog OS=Xenopus laevis GN=zfand3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.166e-12
Identity = 57/209 (27.27%), Postives = 85/209 (40.67%), Query Frame = -1
Query:  258 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVD-VQASSVEPKIIS--------------------VQPSCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 740
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S      +ET S NG+ S+   TV+  Q    E  + S                     + SC S+     +  P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSSQSDLFPSETDSDNGNTSIPTPTVNPTQQLPTELNVDSPSKEDCGPCTDSAHVSLTTPSKRSCDSDSQSEDDTSPMKRPRLLDSGDRPDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 212          
The following BLAST results are available for this feature:
BLAST of CX070123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SAP10_ARATH4.595e-1933.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ1.746e-1861.29Zinc finger AN1 domain-containing stress-associate... [more]
SAP14_ORYSJ2.521e-1749.33Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN3_RAT8.393e-1326.19AN1-type zinc finger protein 3 OS=Rattus norvegicu... [more]
ZFAN3_MOUSE1.096e-1226.19AN1-type zinc finger protein 3 OS=Mus musculus GN=... [more]
ANUB1_HUMAN1.096e-1246.27AN1-type zinc finger and ubiquitin domain-containi... [more]
ZFAN3_HUMAN1.870e-1225.71AN1-type zinc finger protein 3 OS=Homo sapiens GN=... [more]
ZFAN3_XENLA4.166e-1227.27AN1-type zinc finger protein 3 homolog OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H07-O14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070123 ID=CX070123; Name=CX070123; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTTTCCATAAAACCAGAGCACAGATTCACTCTTAAAC
ACTGAAGCCAACATATAAGTTCTCGCCAACACACGACATAGAGTTCTTCA
TACTGCAGAGATGTCCTATAACTGATAATGGGCCCCCAGCATATATAACA
TTAAAGGACACCTGATAAGATACGTGGCCTTCTCAGAAGAAGCCTCTAAC
AGATGAGCAAGATCATCATTCTTTGATTATTGAAACCTCATCCCATTGAA
TCTAGATTTTATCTAGCTTCTCAGCCTTGATCACAGGGTTTGCTTTAATT
ATAGCATCCCTAGCAGCAGTGCGGTAGTCAAAGGGGCAGTTATGTTTGTC
CGAATAGCGATGTGACACACAGTATAAGTTACCACAGCGACATTTGAATC
CTGTTAAACCAACACGCTTCTTGCAACTGCTGCACCGGCTGGGACCCTCC
TTCGGCTTTGCCTCCACACTCTCGCTCAATTCTGAAGCACATGATGGCTG
CACAGAGATGATTTTTGGCTCCACTGAACTAGCTTGCACATCAACAGTGG
CAGCAGCAACAGATTCACTTCCATTGCTGCTTGACGTTTCATTCACAATG
CTTCCAATAGATGAAGCAGCAAGCTTAGCTTGATCCTGTTTCAGCATTAT
ATCCTTGTAGCATTTGGAACACATATTCATAGTAGCCACACTTCCAAAGA
AACCACAATTGTTGATGCACAAGATAGGGCCCTCAGGAGGAGCTTGGCAT
CCAGTCTCATCATGGTCCATGTTTTCACCACCCCTGCG
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