CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_OLICO (Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.492e-57
Identity = 110/225 (48.89%), Postives = 146/225 (64.89%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 672
            D S TENTR+AYP++ IPNA        PKN+++LA DAFGVLPP++KL  +Q MYHF+SGYTA VAGTE G+  EP   FSACFGA F+   PT Y  ML + + KH    WLVNTGW+GG +G G+R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPS+ILDP NTWADK  +K+T   L  +F++NF  F       +  +  ++LAA P+
Sbjct:  315 DGSKTENTRSAYPLDAIPNASPTGCAGQPKNIVMLAADAFGVLPPIAKLTPSQAMYHFLSGYTAKVAGTERGLGSEPQPEFSACFGAPFLPRDPTVYGEMLRKLIAKHNVDCWLVNTGWTGGKFGIGNRMPIKVTRALLTAALDGSLRNVTFRTDPYFGFAVPTALPGVPSDILDPINTWADKADFKKTAQALVSMFRQNFTKF-------EKLVDADVLAAAPD 532          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_EUBR3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.492e-57
Identity = 123/224 (54.91%), Postives = 149/224 (66.52%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVG-PHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P    P  KNVI L+ DAFGVLPPVS L   QT Y+F+SG+TA +AGTE GI EPT TFSACFG AF+ LHPTKYAA L +KM+K GA  +LVNTGW+    G G RI +  TR IIDAI SG +LNA  KK  +F  E+PTE+ GV S ILDP +T+AD   ++     LA  F +NF  +T  + GK       ++AAGP
Sbjct:  319 DKSVTENTRVSYPINHITNIVKPVSSAPAAKNVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLVNTGWN----GTGKRITIKDTRGIIDAILSGDILNAPTKKIPMFDFEVPTELPGVDSGILDPRDTYADASEWEAKAKDLAERFNKNFVKYTTNEAGK------ALVAAGP 532          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus amyloliquefaciens (strain FZB42) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.492e-57
Identity = 106/201 (52.74%), Postives = 132/201 (65.67%), Query Frame = 1
Query:   13 TENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 615
            TENTRAAYPIE I N   P +  HP+ ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE G+  P  TFS CFG+ F+ L    YA ML  K+ +HG   +LVNTGW+GG YG G R+KL YTR ++ A   G L   +     +FG+  P  V GVP E+L PENTW+DKQAY E  L LA  FK NF+ F++
Sbjct:  315 TENTRAAYPIEMIGNIVQPSIAGHPQAIVFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTSPQTTFSTCFGSPFLPLPAHVYAEMLGHKIDEHGVQVFLVNTGWTGGGYGVGERMKLSYTRAMVKAAIEGRLNQTDMTADSIFGLRSPVHVPGVPDEVLQPENTWSDKQAYNEKALFLANEFKENFKKFSH 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB5) GN=pckA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.251e-57
Identity = 107/222 (48.20%), Postives = 143/222 (64.41%), Query Frame = 1
Query:    7 SVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 672
            S TENTR+AYP+E IPNA        PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EPT  FS CFG+ F+   P+ Y  ML + +  H    WLVNTGW+GG YG G R+ +  TR ++ A   GSL NA ++    FG  +PT + GVPS+IL+P  TWADK  + +T   L G+F++NF  F       + ++  ++ AA P+
Sbjct:  317 SKTENTRSAYPLESIPNASPTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRDLIHNHNVDCWLVNTGWTGGKYGTGHRMPIKVTRALLTAALDGSLRNAEFRTDPYFGFAVPTALPGVPSDILEPAKTWADKAEFDKTARALVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_METNO (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=pckA PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.471e-57
Identity = 104/203 (51.23%), Postives = 135/203 (66.50%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S TENTR AYP+ +IPNA       HPKN+++L CDAFGVLPP++KL  A+ MYHF+SGYTA VAGTE G+K P ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG  G G R+ +  TR+++ A   GSL  A++++   FG  +PT V GV   IL P  TW DK A+ ET  KL  +F+ NF+ F
Sbjct:  315 DASRTENTRCAYPLPFIPNASPTGRAGHPKNIVMLTCDAFGVLPPIAKLTGAEAMYHFLSGYTAKVAGTEKGLKGPEATFSTCFGAPFMPRHPSVYGNLLRDLIARHHVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLTAALDGSLAKADFRRDPYFGFAVPTSVPGVEPHILYPVKTWQDKAAFAETAKKLVEMFQANFKRF 517          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA1_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salinibacter ruber (strain DSM 13855) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.471e-57
Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 672
            D ++T+NTR +YP+ YIPN      G HP +V+ L  DAFGVLPPVS+L+ AQ MYHF+SGYTA VAGTE G+ EP ATFS CFG  F++  P+ YA +L +K+++H    WLVNTG +GG YG G RI+L +TR ++DAI  G+L      +  VFG+ IP  V GVP  +L P  TW D QAY +   +L   F  NFE +         ++  E+ AAGP+
Sbjct:  313 DDTITQNTRGSYPLHYIPNTSSDGRGGHPDHVLFLTYDAFGVLPPVSELSPAQAMYHFLSGYTAKVAGTEAGVNEPKATFSTCFGEPFMVRDPSVYAELLGQKIRRHDTDCWLVNTGMTGGPYGVGHRIELDHTRAMVDAILDGTLGTVARTRDPVFGLSIPDRVPGVPDSVLTPRQTWGDPQAYDQHARELVDAFADNFETYV-------EQVGTEVRAAGPS 529          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_STAHJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.237e-56
Identity = 104/203 (51.23%), Postives = 133/203 (65.52%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S TENTRAAYPI +I N  +P    HP  +I L  DAFGVLPP++KL  +Q MYHF+SG+T+ +AGTE G+ EP  +FS CFGA F+ L+P KYA +L E + KH    +LVNTGW+GG YG G RI L YTR ++D    G L NA + K + FG+ IPTE+E VP  IL+P N W+D   Y+     L   F+ NF+ F
Sbjct:  313 DNSYTENTRAAYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPIAKLTKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLNPNKYADLLGELIDKHDVDVYLVNTGWTGGKYGVGRRISLHYTRYMVDQAIKGKLKNAEFTKDEKFGLSIPTEMEDVPKTILNPINAWSDSDKYRAQADDLIQRFEENFKKF 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHIME (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium meliloti GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.237e-56
Identity = 104/209 (49.76%), Postives = 138/209 (66.03%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S+TENTR AYP+ +IPNA      P P+ +I+L  DAFGVLPP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + ++G T WLVNTGW+GG++G GSR+ +  TR ++ A   GSL NA+++    FG  +P  V GV + ILDP +TWAD  AY     +L  +F  NF  F  +  G
Sbjct:  314 DGSLTENTRCAYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGSRMPIKVTRALLSAALDGSLNNASFRTDANFGFAVPVSVPGVEAGILDPRSTWADGVAYDTQARRLVDMFIANFAKFERHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.237e-56
Identity = 105/209 (50.24%), Postives = 134/209 (64.11%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S+TENTR AYP+++IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  SG L    ++    FG  +P  V GV   ILDP +TWADK AY     KL  +F  NF  F N+  G
Sbjct:  314 DGSLTENTRCAYPMDFIPNASKTGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLVNTGWTGGAYGTGKRMPIKATRALLAAALSGELGQVEFRADTNFGFAVPVSVHGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFENHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_METPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.237e-56
Identity = 100/220 (45.45%), Postives = 143/220 (65.00%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILA 660
            D ++TENTR AYP+++I NA       HPKN+++L CDAFGV+PP+++L  A+ MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L   M +HG   WLVNTGW+GG  G G R+ +  TR+++ A   GSL    +++   FG  +P EV GV +++L P  TW +K A+ ET  +L  +F+ NF+ F ++ +  D +  E + A
Sbjct:  317 DATLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIARLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRALMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQTEFRRDPYFGFSVPVEVAGVETQVLSPVETWTNKAAFAETATRLVTMFRENFKRFESH-VDADVRAAEPVAA 535          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_OLICO2.492e-5748.89Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotr... [more]
PCKA_EUBR32.492e-5754.91Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_BACA22.492e-5752.74Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_RHOPS7.251e-5748.20Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_METNO9.471e-5751.23Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA1_SALRD9.471e-5748.21Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salin... [more]
PCKA_STAHJ1.237e-5651.23Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_RHIME1.237e-5649.76Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHIL31.237e-5650.24Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_METPB1.237e-5645.45Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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