CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHISN (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium sp. (strain NGR234) GN=pckA PE=3 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.615e-56
Identity = 103/207 (49.76%), Postives = 138/207 (66.67%), Query Frame = 1
Query:    7 SVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            S+TENTR AYP+++IPNA      P P+ +I+L  DAFGVLPP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + ++G T WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++    FG  +P  V GV   ILDP +TW+D QAY     +L  +F  NF  F ++  G
Sbjct:  316 SLTENTRIAYPLDFIPNASETGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAYGTGSRMPIKVTRALLSAALDGSLNSAAFRTDANFGFAVPVSVPGVDDRILDPRSTWSDGQAYDAQARRLVDMFIANFAKFESHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACSK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus clausii (strain KSM-K16) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.615e-56
Identity = 106/200 (53.00%), Postives = 133/200 (66.50%), Query Frame = 1
Query:   10 VTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            +TENTRAAYP+E IPNA +P V   PK +I L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE GI +P ATFS CFGA F+   P +YA ML +K++      +LVNTGW+GGSYG G+RIKL YTR +++A   G L         +FG+ +PT   GVP E+L P   W D+ AY+ T L+LA  F  NF  F
Sbjct:  313 LTENTRAAYPLEAIPNALLPSVAGPPKAIIFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGITQPEATFSTCFGAPFLPRKPEEYATMLGDKLENDDVQVFLVNTGWTGGSYGTGTRIKLAYTRAMVEAALQGKLDEIETVCDPIFGLYVPTHCPGVPDELLTPRRVWKDEAAYEATALQLAKQFHENFSAF 512          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_PARL1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.110e-56
Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 1
Query:    7 SVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            ++ EN+R AYP+ +IPNA      PHPKN+I+L  DAF VLPPV++L  +Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HPT+Y  +L + + +H  + WLVNTGW+GG YG G+R+ +  TR ++ A   GSL N  ++    FG E+P +V GV ++IL+P  TWADK AY     KL  +F  NF  F
Sbjct:  317 ALAENSRGAYPLSFIPNASATGRAPHPKNIIMLTADAFSVLPPVARLTPSQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMSRHPTEYGNLLRDLIAQHKVSCWLVNTGWTGGVYGTGNRMPIKATRALLAAALDGSLNNVEFRTDPNFGFEVPVDVPGVDNKILNPRETWADKAAYDAQAQKLVKMFIENFAKF 517          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_SULDN (Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.756e-56
Identity = 103/201 (51.24%), Postives = 139/201 (69.15%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 603
            D S TENTR +YPIE+I N +      HP+N+I L+ DAFG+LPPVSKL   Q MY+F+SGYTA VAGTE GI +P ATFS+CFG AF+ LHPT YA +L EK+ KH    +LVNTGW+GG+YG G+R+ +  TR  I+AI  GS+  + +  T  F +++P  +  +  EIL+P N W+DK+A+ +T   LA +F  NF+
Sbjct:  308 DGSKTENTRVSYPIEHIKNHETSLSAGHPENIIFLSADAFGILPPVSKLTREQAMYYFLSGYTAKVAGTERGITKPVATFSSCFGEAFLPLHPTVYAKLLGEKIDKHDVHVYLVNTGWTGGAYGVGTRMSIKDTRACINAILDGSIKESEFDTTKTFKLQVPKTLGNINPEILNPRNAWSDKEAFDKTTDMLANMFNENFK 508          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHILW (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.756e-56
Identity = 104/209 (49.76%), Postives = 134/209 (64.11%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S+TENTR AYP+++IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  +G L    ++    FG  +P  V GV S ILDP +TWADK AY     KL  +F  NF  F  +  G
Sbjct:  314 DGSLTENTRCAYPMDFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRALLAAALTGELGQVEFRADTNFGFAVPVSVNGVDSSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFEGHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHIEC (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.700e-56
Identity = 104/209 (49.76%), Postives = 134/209 (64.11%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S+TENTR AYP+ +IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  SG L    ++    FG  +P  V+GV   ILDP +TWADK AY     KL  +F  NF  F ++  G
Sbjct:  314 DGSLTENTRCAYPMHFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRGLLAAALSGKLGQLQFRTDTNFGFAVPVSVDGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFEDHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACLD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.700e-56
Identity = 103/205 (50.24%), Postives = 132/205 (64.39%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 615
            D   TENTRAAYPI+ I N   P +  HP+ ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE GI  P ATFS CFG+ F+ L    YA ML  K+ +HG   +LVNTGW+GG YG G R+ L YTR ++ A   G L  A  +   +FG+  P  V GVP ++LDP  TW D+  Y+E  + LA  FK+NF+ F+N
Sbjct:  311 DSFYTENTRAAYPIDAIDNIVKPSIAAHPQTIVFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGITTPEATFSTCFGSPFLPLPAHVYAEMLGRKIDEHGVGVFLVNTGWTGGGYGTGERMSLAYTRAMVQAAIEGELDKAEMRTDRIFGLHSPVHVPGVPDQVLDPAKTWTDENEYEEKAIHLAKAFKQNFKKFSN 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_STAES (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D + TENTRAAYPI+YI N   P    HP  +I L  DAFGV+PP+SKL   Q MYHF+SG+T+ +AGTE G+ EP  +FS CFGA F+ L PTKYA +L   +  H    +LVNTGW+GG YG G RI L YTR+++D   SG L N  Y K D FG+ IP +++ VP+ IL+P N W +K  YK     L   F  NF+ F
Sbjct:  313 DNTYTENTRAAYPIDYIENIVTPSKAAHPNTIIFLTADAFGVIPPISKLTKDQAMYHFLSGFTSKLAGTERGVTEPQPSFSTCFGAPFLPLSPTKYADLLGNLIDIHDVDVYLVNTGWTGGKYGIGRRISLHYTREMVDQAISGKLKNTKYIKDDTFGLNIPVQIDSVPTTILNPINAWNNKDNYKAQAYDLIQRFNNNFKKF 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_STAEQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D + TENTRAAYPI+YI N   P    HP  +I L  DAFGV+PP+SKL   Q MYHF+SG+T+ +AGTE G+ EP  +FS CFGA F+ L PTKYA +L   +  H    +LVNTGW+GG YG G RI L YTR+++D   SG L N  Y K D FG+ IP +++ VP+ IL+P N W +K  YK     L   F  NF+ F
Sbjct:  313 DNTYTENTRAAYPIDYIENIVTPSKAAHPNTIIFLTADAFGVIPPISKLTKDQAMYHFLSGFTSKLAGTERGVTEPQPSFSTCFGAPFLPLSPTKYADLLGNLIDIHDVDVYLVNTGWTGGKYGVGRRISLHYTREMVDQAISGKLKNTKYIKDDTFGLNIPVQIDSVPTTILNPINAWNNKDNYKAQAYDLIQRFNNNFKKF 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_EUBE2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 120/224 (53.57%), Postives = 147/224 (65.62%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVG-PHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P    P  KNVI L+ DAFGVLPPVS L   QT Y+F+SG+TA +AGTE GI EPT TFSACFG AF+ LHPTKYAA L +KM+K GA  +LVNTGW+    G G RI +  TR IIDAI SG++  A  KK  +F  E+PTE+ GV   ILDP +T+AD   ++     LA  F +NF  +T  + GK       ++AAGP
Sbjct:  319 DKSVTENTRVSYPINHIENIVRPISSAPAAKNVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLVNTGWN----GTGKRISIKDTRGIIDAILSGAINTAPTKKIPMFNFEVPTELPGVDPAILDPRDTYADASEWETKAKDLAARFNKNFVKYTGNEAGK------ALVAAGP 532          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_RHISN1.615e-5649.76Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_BACSK1.615e-5653.00Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_PARL12.110e-5650.75Phosphoenolpyruvate carboxykinase [ATP] OS=Parviba... [more]
PCKA_SULDN2.756e-5651.24Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfuri... [more]
PCKA_RHILW2.756e-5649.76Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHIEC4.700e-5649.76Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_BACLD4.700e-5650.24Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STAES6.139e-5650.74Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAEQ6.139e-5650.74Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_EUBE26.139e-5653.57Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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