CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus pumilus (strain SAFR-032) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 103/205 (50.24%), Postives = 134/205 (65.37%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 615
            D   TENTRAAYPIE I N   P +  HP  ++ L  DAFGVLPP+S+L   Q MYHF+SGYT+ +AGTE G+  P  TFS CFG+ F+ L    YA ML +K+ +HGA  +LVNTGW+GG YG G R+ L +TR ++ A   G L NA     D+FG+ IP  + GVP E+L P  TW D++AY+E    LA  FK+NF+ F++
Sbjct:  311 DTFFTENTRAAYPIEMIDNIVKPSIAGHPSAIVFLTADAFGVLPPISRLTKEQAMYHFLSGYTSKLAGTERGVTSPETTFSTCFGSPFLPLPAHVYAEMLGKKIDEHGAKVFLVNTGWTGGGYGTGKRMNLAHTRAMVQAAIEGDLDNAEMITDDIFGLHIPLHIPGVPDEVLQPSKTWDDQEAYQEKAHFLANEFKKNFQKFSH 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACFR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 121/224 (54.02%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P   GPH K VI L+ DAFGVLPPVS LN  Q  Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  K    F   +PTE+ GV  +ILDP +T+AD   + E    LAG F +NF  FT  + GK      +++AAGP
Sbjct:  320 DKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYADPAQWNEKAKDLAGRFIKNFAKFTGNEAGK------KLVAAGP 533          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACFN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 121/224 (54.02%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P   GPH K VI L+ DAFGVLPPVS LN  Q  Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  K    F   +PTE+ GV  +ILDP +T+AD   + E    LAG F +NF  FT  + GK      +++AAGP
Sbjct:  320 DKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYADPAQWNEKAKDLAGRFIKNFAKFTGNEAGK------KLVAAGP 533          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_PARD8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.017e-56
Identity = 120/224 (53.57%), Postives = 145/224 (64.73%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P   GPH K VI L+ DAFGVLPPVS L   QT Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKY   L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  KK   F  E+PT + GV  +ILDP +T+AD   + E    LA  F++NF  FT  + GK       ++AAGP
Sbjct:  320 DKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYGEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSINEAPTKKIPYFDFEVPTALPGVDPKILDPRDTYADPAQWDEKAKDLAARFQKNFAKFTGNEAGK------ALVAAGP 533          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_METRJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.017e-56
Identity = 103/223 (46.19%), Postives = 142/223 (63.68%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S+TENTR AYP+++I NA       HPKN+++L CDAFGV+PP++KL  A+ MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L + + KH    WLVNTGW+GG  G G R+ +  TR+++ A   GSL  A +++   FG  +P  V GV   IL P  TWA+K A+ ET  +L  +F  NF+ F       ++ +  ++ +AGP
Sbjct:  317 DASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTGPEATFSTCFGAPFMPRHPSTYGNLLRDLIAKHSVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQAEFRRDPYFGFAVPVSVPGVEPHILTPVKTWANKGAFVETAARLVKMFDDNFKRF-------EDHVDADVRSAGP 532          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_STAS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 103/203 (50.74%), Postives = 132/203 (65.02%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D   TENTRAAYPI +I N   P    HP  +I L  DAFGVLPP+SKL   Q MYHF+SG+TA +AGTE G+ EP  +FS CFG+ F+ L+   YA +L   + KHG   +LVNTGW+GG YG G RI L YTR++++   +G L +A Y K D+FG++IP EVE VP  +L+P N W+  +AY+     L   FK NFE F
Sbjct:  313 DNQYTENTRAAYPIHHIDNIVTPSKAAHPNTIIFLTADAFGVLPPISKLTKDQAMYHFLSGFTAKLAGTERGVTEPEPSFSTCFGSPFLPLNAKVYADLLGNLIDKHGVDVYLVNTGWTGGKYGVGRRISLNYTRQMVNQAITGKLRDAEYVKDDMFGLDIPVEVEDVPQTLLNPINAWSKPEAYRTQAQDLINRFKSNFEKF 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BREBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 101/197 (51.27%), Postives = 131/197 (66.50%), Query Frame = 1
Query:   13 TENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 603
            TENTRAAYP+E IP A IP VG  P  ++ L  D+FGVLPP+SKLN  Q MYHF+SGYT+ +AGTE G+  P   FS CFG+ F+ LHP  YA ML +K+ +     +LVNTGW+GG  G G R+KL YTR ++ A  +G L   +Y   ++FGV++PT    VP+E+L P NTWA+K+ Y +    LA  F  NFE
Sbjct:  314 TENTRAAYPVEAIPGAVIPGVGGQPNVIVFLTADSFGVLPPISKLNKEQAMYHFLSGYTSKMAGTERGVTAPQTEFSTCFGSPFLPLHPVVYAEMLGKKIDERKVQVYLVNTGWTGGPVGVGQRMKLSYTRAMVTAALNGELEKVDYVADEIFGVQVPTSCPNVPAEVLQPRNTWANKEDYDKQAADLAARFIENFE 510          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHIE6 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CIAT 652) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 103/209 (49.28%), Postives = 133/209 (63.64%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S+TENTR AYP+ +IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L + + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  SG L    ++    FG  +P  V GV   ILDP +TWADK AY     KL  +F  NF  F ++  G
Sbjct:  314 DGSLTENTRCAYPMHFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKDLISRHGVNCWLVNTGWTGGAYGTGKRMPIKATRALLAAALSGELGQVEFRADPNFGFAVPVSVNGVDGGILDPRSTWADKTAYDVQAEKLVSMFIANFAKFEDHVDG 522          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_AGRVS (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pckA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 103/203 (50.74%), Postives = 131/203 (64.53%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S TENTR AYP+ +IPNA       HPK +I+L  DAFGV+PP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +H    WLVNTGW+GG+YG G+R+ +  TR ++ A  SG L    ++    FG  +P  VEGV + ILDP +TWA+   Y     KL G+F  NFE F
Sbjct:  314 DGSKTENTRCAYPLNFIPNASPTGRAGHPKTIIMLTADAFGVMPPIAKLTPEQAMYHFLSGYTAKVAGTERGVTEPEATFSTCFGAPFMPRHPAEYGNLLKELIARHEVDCWLVNTGWTGGAYGVGNRMPIKATRALLTAALSGELKKVEFRTDANFGFAVPVSVEGVDTSILDPRSTWANGTDYDAQAKKLVGMFIANFEKF 516          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_OCEIH (Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanobacillus iheyensis GN=pckA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 109/223 (48.88%), Postives = 141/223 (63.23%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S+TENTRAAYP+E I N   P V  HP  +I L  DA G LPP+SKL   Q MYHF+SGYT+ +AGTE G+ EP ATFSACFG+ F+ L P+KYA ML +K+       +L+NTGW+GGSYG G RIKL +TR ++ +   G L +      ++FG++IP  V GVP E+L P+ TW +K+AY +    LA  F  NF+ FT          +E I  AGP
Sbjct:  309 DTSLTENTRAAYPLENIDNIINPSVAGHPNTIIFLTADASGTLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTEPLATFSACFGSPFLPLAPSKYAEMLGKKIDMFDTNVFLINTGWTGGSYGVGDRIKLSFTRAMVHSALEGELNSIETITDEIFGLQIPAHVPGVPDELLVPKQTWGNKEAYMKEAQTLALKFHENFKKFT--------LASETIKQAGP 523          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACP26.139e-5650.24Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACFR6.139e-5654.02Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_BACFN6.139e-5654.02Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_PARD88.017e-5653.57Phosphoenolpyruvate carboxykinase [ATP] OS=Parabac... [more]
PCKA_METRJ8.017e-5646.19Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_STAS11.368e-5550.74Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BREBN1.368e-5551.27Phosphoenolpyruvate carboxykinase [ATP] OS=Breviba... [more]
PCKA_RHIE61.786e-5549.28Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_AGRVS2.333e-5550.74Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_OCEIH3.047e-5548.88Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanob... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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