CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_PARDP (Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoccus denitrificans (strain Pd 1222) GN=pckA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 103/211 (48.82%), Postives = 136/211 (64.45%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKD 633
            D S+T+N R AYP+E I NA    +G  P+NVI+L CDA+GVLPP+++L  AQ MYHF+SG+T+   GTE G+ EPT TFS CFGA F+   P  Y  +L EK+ K GA  WLVNTGW+GG++G G R+ +  TR ++ A   GSL +A ++K   FG E+P  V GV  ++LDP  TW D  AY     KL G+F  NF  + + KI  D
Sbjct:  316 DNSLTDNMRCAYPLEQISNASETSLGGQPRNVIMLTCDAYGVLPPIARLTPAQAMYHFLSGFTSKTPGTEVGVTEPTPTFSTCFGAPFMPRRPEVYGKLLQEKIAKTGAACWLVNTGWTGGAFGTGKRMPIKATRALLTAALDGSLNDAQFRKDPNFGFEVPVSVPGVEDKLLDPRQTWTDGAAYDAQARKLVGMFSDNFAQYAD-KIDDD 525          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides thetaiotaomicron GN=pckA PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 120/224 (53.57%), Postives = 145/224 (64.73%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            DKSVTENTR +YPI +I N   P   GPH K VI L+ DAFGVLPPVS LN  QT Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKY   L +KM+K GA  +LVNTGW+    G G RI +  TR IIDAI  GS+  A  K    F   +PTE+ GV  +ILDP +T+     ++E    LAG F +NF  FT  + GK       ++AAGP
Sbjct:  320 DKSVTENTRVSYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNAEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYGEELVKKMEKTGAKAYLVNTGWN----GTGKRISIKDTRGIIDAILDGSIDKAPTKVMPYFDFVVPTELPGVDPKILDPRDTYECACQWEEKAKDLAGRFIKNFAKFTGNEAGK------ALVAAGP 533          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_MESSB (Phosphoenolpyruvate carboxykinase [ATP] OS=Mesorhizobium sp. (strain BNC1) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.158e-54
Identity = 104/206 (50.49%), Postives = 131/206 (63.59%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S TENTR AYP+ +I NA        PKNVI+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL  A ++    FG  +P  V GV   ILDP +TWADK AY     +L  +F  NF  F N+
Sbjct:  314 DGSRTENTRCAYPLHFISNASETGRAGQPKNVIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSVYGNLLRDLIAEHEVDCWLVNTGWTGGAYGTGHRMPIKVTRALLSAALDGSLRTAQFRTDPNFGFAVPVAVPGVDGTILDPRSTWADKAAYDVQAERLVSMFVANFGKFENH 519          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RUBXD (Phosphoenolpyruvate carboxykinase [ATP] OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.512e-54
Identity = 109/225 (48.44%), Postives = 150/225 (66.67%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIK-EPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 672
            D S+TENTRAAYP+EYI  A       HP  V+ L  DAFGVLPP+S L+  Q  Y+F+SGYTA +AGTE  ++ +  ATFSACFGA F+ L  T YAAML+EK+++HG+  +L+NTGWSGG YG G R+ +  TR+++ A+ +G++  +       FG+++P EV GVPS IL+P  TWAD+ AY +   KLA LF+ NF+ F       ++ + E +  AGPN
Sbjct:  314 DASLTENTRAAYPLEYIEGAVDSGRAGHPAAVLFLTADAFGVLPPISVLSPEQAAYYFLSGYTAKLAGTEADMEADVEATFSACFGAPFLPLPATTYAAMLSEKLREHGSRCYLINTGWSGGPYGVGERVDIAATRQMVRAVIAGNIDESKTYTDPFFGLQVPLEVPGVPSGILNPRETWADRAAYDDQAAKLADLFRENFKKF-------EDGVPEGVRKAGPN 531          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_AZOC5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.512e-54
Identity = 100/206 (48.54%), Postives = 135/206 (65.53%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+TENTR+AYP+++IPNA        PKN+I+L  DAFGV+PP+++L  AQ MYHF+SGYTA VAGTE G+K+P ATFS CFGA F+  HP+ Y  +L + + K+    WLVNTGW+GG YG G R+ +  TR ++ A   GSL +A ++    FG  +P+ V G+   IL P  TWADK  +  T  KL  +F+ NF  F  +
Sbjct:  315 DGSLTENTRSAYPLDFIPNASPTGRAGVPKNIIMLTADAFGVMPPIARLTPAQAMYHFLSGYTAKVAGTEKGVKDPEATFSTCFGAPFMPRHPSVYGNLLRDLIAKYQVDCWLVNTGWTGGKYGVGRRMPIKVTRTLLTAALDGSLKDAAFRTDPYFGFSVPSSVPGIEPHILYPSKTWADKADFDATARKLVAMFRDNFAKFEGH 520          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_LEPBP (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pckA PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.975e-54
Identity = 104/197 (52.79%), Postives = 133/197 (67.51%), Query Frame = 1
Query:   13 TENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 603
            TENTR +YPI +I N +      HP  VI L  DA+GVLP VSKL++ Q MYHF+SGYTA VAGTE G+KEP ATFSACFG AF+ LHPT YA +L EKM+KH    +L+NTG  GG YG G R+ LP TR+II+ I +G++  + ++K  VF V  P  V GV + IL+P N W +K+ Y +T   LA  F  N++
Sbjct:  316 TENTRVSYPIFHIDNIQPGSKAGHPNTVIFLTYDAYGVLPAVSKLSIEQAMYHFLSGYTAKVAGTERGVKEPQATFSACFGQAFMTLHPTYYAKLLGEKMKKHQVNAYLINTGLVGGKYGVGKRMNLPATRQIINEILNGNIEKSEFEKHPVFQVSFPKSVNGVDAHILNPRNAWENKEDYDKTAADLAKQFVENYK 512          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_LEPBA (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=pckA PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.975e-54
Identity = 104/197 (52.79%), Postives = 133/197 (67.51%), Query Frame = 1
Query:   13 TENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 603
            TENTR +YPI +I N +      HP  VI L  DA+GVLP VSKL++ Q MYHF+SGYTA VAGTE G+KEP ATFSACFG AF+ LHPT YA +L EKM+KH    +L+NTG  GG YG G R+ LP TR+II+ I +G++  + ++K  VF V  P  V GV + IL+P N W +K+ Y +T   LA  F  N++
Sbjct:  316 TENTRVSYPIFHIDNIQPGSKAGHPNTVIFLTYDAYGVLPAVSKLSIEQAMYHFLSGYTAKVAGTERGVKEPQATFSACFGQAFMTLHPTYYAKLLGEKMKKHQVNAYLINTGLVGGKYGVGKRMNLPATRQIINEILNGNIEKSEFEKHPVFQVSFPKSVNGVDAHILNPRNAWENKEDYDKTAADLAKQFVENYK 512          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_SALTI (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhi GN=pckA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.368e-54
Identity = 116/224 (51.79%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S TENTR +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  324 DGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_SALSV (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella schwarzengrund (strain CVM19633) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.368e-54
Identity = 116/224 (51.79%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S TENTR +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  324 DGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_SALPK (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A (strain AKU_12601) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.368e-54
Identity = 116/224 (51.79%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S TENTR +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  324 DGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_PARDP3.979e-5548.82Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoc... [more]
PCKA_BACTN8.864e-5553.57Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_MESSB1.158e-5450.49Phosphoenolpyruvate carboxykinase [ATP] OS=Mesorhi... [more]
PCKA_RUBXD1.512e-5448.44Phosphoenolpyruvate carboxykinase [ATP] OS=Rubroba... [more]
PCKA_AZOC51.512e-5448.54Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhiz... [more]
PCKA_LEPBP1.975e-5452.79Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_LEPBA1.975e-5452.79Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_SALTI3.368e-5451.79Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALSV3.368e-5451.79Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPK3.368e-5451.79Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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