CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:525..1310. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.361e-62
Identity = 114/205 (55.61%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 615
            D S+TENTR AYPI+YI N   P V  HPK +I L  DAFGVLPP+SKL   Q MYHF+SG+T+ +AGTE G+ EP   FS CFG+ F+ L  T YA ML +K+ +HGA  +LVNTGW+GG YG GSR+KL YTR ++ A   G L N    +  VFG+ IPT VEGVPS++L+P   WADK AY     +LAGLF  NF+ F N
Sbjct:  311 DGSLTENTRVAYPIQYIENIVDPSVAGHPKTIIFLTADAFGVLPPISKLTKEQAMYHFLSGFTSKLAGTERGVTEPEPVFSTCFGSPFLPLPATVYAEMLGQKIDEHGAQVYLVNTGWTGGEYGTGSRMKLSYTRTMVRAAIDGKLTNVETTQDAVFGLHIPTAVEGVPSQVLNPREAWADKAAYDAKAAELAGLFNENFKKFAN 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_PELPD (Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobacter propionicus (strain DSM 2379) GN=pckA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.732e-62
Identity = 107/206 (51.94%), Postives = 143/206 (69.42%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S TENTRA+YP+ +IPN     +  HP N+I+L CDA+GVLPP+S L   Q MYHF+SGYTA VAGTE G+KEPTATFS CFG  F+ L+PT Y  +L EK+ +H  + WLVNTGW+GG YG G RI++ Y+R +I+A   G+L + +++    FG+ IPT   GVPSE+L+P NTW+D   Y +T  +L  +F+ NF  +  Y
Sbjct:  316 DDSFTENTRASYPLTHIPNIVPSGIAGHPANIIMLTCDAYGVLPPISHLTKEQAMYHFLSGYTARVAGTEAGVKEPTATFSTCFGGPFMALNPTVYGELLREKISRHNVSCWLVNTGWNGGPYGVGERIRISYSRALINAALDGTLADGSFETDPFFGLAIPTSCPGVPSEMLNPRNTWSDPARYDDTASRLVAMFRSNFTKYQPY 521          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.732e-62
Identity = 114/221 (51.58%), Postives = 149/221 (67.42%), Query Frame = 1
Query:    7 SVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            ++TENTRAAYP+++IPNA IP +G HP+ V+ L  DAFGV+PP++KL   Q MYHF+SGYT+ +AGTE GI +P ATFS CFGA F+   P  YA +L E++ KHGA+ +LVNTGW+GG  G G R+ LPYTR ++ A   G L    +    VFG+ +PT   GVP+E+L+P +TW DK+ Y     KLAGLF  NF  F +        + EEI AAGP
Sbjct:  311 ALTENTRAAYPVDFIPNAVIPGIGGHPRTVVFLTADAFGVMPPIAKLTREQAMYHFLSGYTSKLAGTERGITDPQATFSTCFGAPFLPRSPRVYADLLGERIAKHGASVYLVNTGWTGGPSGIGRRMSLPYTRAMVRAAIKGELEGVEFVPDPVFGILVPTSCPGVPAEVLNPRHTWQDKEKYDAMARKLAGLFAENFTKFRD--------VPEEIRAAGP 523          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61
Identity = 116/209 (55.50%), Postives = 146/209 (69.86%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S TENTR +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  306 DASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYAETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61
Identity = 116/209 (55.50%), Postives = 146/209 (69.86%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S TENTR +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  306 DASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.853e-61
Identity = 112/203 (55.17%), Postives = 140/203 (68.97%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D ++TENTRAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L  A   K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  311 DTTLTENTRAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKAETAKHDIFGLEVPRHVPGVPDEVLMPEQTWADKDAYKVKAIELANEFKENFKKF 513          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.338e-61
Identity = 110/203 (54.19%), Postives = 144/203 (70.94%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S TENTRA+YPI +IPN      G HP +VI+L CDAFGVLPP+++L  AQ MYHF+SGYTA VAGTE G+ EP ATFSACFGA F+ L P+ YA +L +K+  H  + WLVNTGWSGG  G G R+K+ Y+R +++A   G+L   ++ K  VFG++IP+   G+P++IL+P N W+DK AY  T  KL  +F+ NFE F
Sbjct:  315 DASFTENTRASYPITHIPNIVGEGCGGHPNHVIMLTCDAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTEAGVTEPQATFSACFGAPFMALRPSLYADLLGKKIASHKVSCWLVNTGWSGGGPGIGGRMKIAYSRALVNAALDGTLGAGSFVKDSVFGLDIPSACPGLPADILNPRNVWSDKSAYDATAHKLVEMFRHNFEQF 517          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.277e-61
Identity = 111/203 (54.68%), Postives = 142/203 (69.95%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S+TENTR+AYPI  I N      G HPKN++ L  DAFGVLPP+S+L   QTMY FISG+TA + GTE G+ EP  TFS CFGA F+  HP +YA +LA+K+++ GA  WLVNTGW+GG YG G R+ + +TR +I+A  SG L N  +++   FG+EIPTEV GVP E+L+P   WADK AY  T  KLA +F+ NF+ F
Sbjct:  309 DGSLTENTRSAYPITQIDNIVPEGRGGHPKNIVFLTADAFGVLPPLSRLTPEQTMYQFISGFTAKIPGTEQGVTEPQPTFSTCFGAPFMPRHPGEYARLLAQKVRESGANVWLVNTGWTGGQYGEGQRMSIQHTRTLINAALSGQLDNVKFEREPFFGLEIPTEVPGVPKEVLNPREAWADKAAYDRTARKLARMFRENFKRF 511          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.081e-60
Identity = 115/209 (55.02%), Postives = 147/209 (70.33%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S TENTR +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++K+    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW+DK AY ET  KLA +F +NF+ + + K G
Sbjct:  306 DASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNPINTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=pckA PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.412e-60
Identity = 110/206 (53.40%), Postives = 138/206 (66.99%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+T NTR AYP+EYI NA    +G HPKNVI+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+   GAT WLVNTGW+GG+YG G R+ +  TR ++ A   GSL N  ++K   FG E+PTE+ GV S +LDP +TWAD  AY     KL  +F  NF  +  Y
Sbjct:  316 DDSLTANTRCAYPLEYISNASATGMGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKITSLGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLANVTFRKDPNFGFEVPTELHGVDSSLLDPRSTWADPAAYDAQAKKLVEMFANNFAQYVPY 521          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_LYSSC3.361e-6255.61Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_PELPD5.732e-6251.94Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobac... [more]
PCKA2_MOOTA5.732e-6251.58Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_CAMJJ2.845e-6155.50Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ82.845e-6155.50Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_BACWK4.853e-6155.17Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_GEOSM6.338e-6154.19Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_DEIGD8.277e-6154.68Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_CAMJD1.081e-6055.02Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_RHOS51.412e-6053.40Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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